Model info
| Transcription factor | KLF5 (GeneCards) | ||||||||
| Model | KLF5_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGGGYGKGGYnKdn | ||||||||
| Best auROC (human) | 0.969 | ||||||||
| Best auROC (mouse) | 0.974 | ||||||||
| Peak sets in benchmark (human) | 32 | ||||||||
| Peak sets in benchmark (mouse) | 23 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| HGNC | HGNC:6349 | ||||||||
| EntrezGene | GeneID:688 (SSTAR profile) | ||||||||
| UniProt ID | KLF5_HUMAN | ||||||||
| UniProt AC | Q13887 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | KLF5 expression | ||||||||
| ReMap ChIP-seq dataset list | KLF5 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 211.0 | 17.0 | 102.0 | 170.0 |
| 02 | 23.0 | 2.0 | 472.0 | 3.0 |
| 03 | 4.0 | 4.0 | 484.0 | 8.0 |
| 04 | 12.0 | 18.0 | 465.0 | 5.0 |
| 05 | 89.0 | 92.0 | 4.0 | 315.0 |
| 06 | 23.0 | 1.0 | 471.0 | 5.0 |
| 07 | 20.0 | 5.0 | 272.0 | 203.0 |
| 08 | 8.0 | 0.0 | 482.0 | 10.0 |
| 09 | 25.0 | 15.0 | 415.0 | 45.0 |
| 10 | 53.0 | 317.0 | 55.0 | 75.0 |
| 11 | 124.0 | 91.0 | 96.0 | 189.0 |
| 12 | 52.0 | 68.0 | 303.0 | 77.0 |
| 13 | 77.0 | 62.0 | 251.0 | 110.0 |
| 14 | 74.0 | 105.0 | 247.0 | 74.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.519 | -1.92 | -0.201 | 0.304 |
| 02 | -1.64 | -3.573 | 1.32 | -3.325 |
| 03 | -3.126 | -3.126 | 1.345 | -2.584 |
| 04 | -2.234 | -1.868 | 1.305 | -2.961 |
| 05 | -0.335 | -0.302 | -3.126 | 0.917 |
| 06 | -1.64 | -3.903 | 1.317 | -2.961 |
| 07 | -1.77 | -2.961 | 0.771 | 0.48 |
| 08 | -2.584 | -4.4 | 1.34 | -2.394 |
| 09 | -1.561 | -2.034 | 1.191 | -1.0 |
| 10 | -0.841 | 0.923 | -0.805 | -0.503 |
| 11 | -0.008 | -0.313 | -0.26 | 0.409 |
| 12 | -0.86 | -0.599 | 0.878 | -0.477 |
| 13 | -0.477 | -0.689 | 0.691 | -0.126 |
| 14 | -0.516 | -0.172 | 0.675 | -0.516 |