Transcription factor | KLF6 (GeneCards) | ||||||||
Model | KLF6_HUMAN.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 19 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvvRGGGYGKRGvnbRSvv | ||||||||
Best auROC (human) | 0.946 | ||||||||
Best auROC (mouse) | 0.604 | ||||||||
Peak sets in benchmark (human) | 16 | ||||||||
Peak sets in benchmark (mouse) | 2 | ||||||||
Aligned words | 498 | ||||||||
TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
HGNC | HGNC:2235 | ||||||||
EntrezGene | GeneID:1316 (SSTAR profile) | ||||||||
UniProt ID | KLF6_HUMAN | ||||||||
UniProt AC | Q99612 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | KLF6 expression | ||||||||
ReMap ChIP-seq dataset list | KLF6 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 77.0 | 92.0 | 253.0 | 74.0 |
02 | 110.0 | 123.0 | 238.0 | 25.0 |
03 | 221.0 | 94.0 | 139.0 | 42.0 |
04 | 228.0 | 9.0 | 183.0 | 76.0 |
05 | 24.0 | 3.0 | 404.0 | 65.0 |
06 | 12.0 | 0.0 | 474.0 | 10.0 |
07 | 22.0 | 26.0 | 442.0 | 6.0 |
08 | 129.0 | 227.0 | 0.0 | 140.0 |
09 | 58.0 | 3.0 | 424.0 | 11.0 |
10 | 14.0 | 11.0 | 342.0 | 129.0 |
11 | 104.0 | 32.0 | 339.0 | 21.0 |
12 | 43.0 | 15.0 | 415.0 | 23.0 |
13 | 114.0 | 225.0 | 103.0 | 54.0 |
14 | 146.0 | 158.0 | 68.0 | 124.0 |
15 | 31.0 | 78.0 | 259.0 | 128.0 |
16 | 73.0 | 63.0 | 302.0 | 58.0 |
17 | 80.0 | 85.0 | 299.0 | 32.0 |
18 | 173.0 | 55.0 | 215.0 | 53.0 |
19 | 128.0 | 116.0 | 226.0 | 26.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.469 | -0.294 | 0.707 | -0.508 |
02 | -0.118 | -0.008 | 0.646 | -1.554 |
03 | 0.572 | -0.273 | 0.113 | -1.059 |
04 | 0.603 | -2.476 | 0.385 | -0.482 |
05 | -1.592 | -3.317 | 1.173 | -0.635 |
06 | -2.226 | -4.393 | 1.332 | -2.386 |
07 | -1.674 | -1.517 | 1.262 | -2.811 |
08 | 0.039 | 0.599 | -4.393 | 0.12 |
09 | -0.746 | -3.317 | 1.221 | -2.303 |
10 | -2.089 | -2.303 | 1.007 | 0.039 |
11 | -0.174 | -1.32 | 0.998 | -1.717 |
12 | -1.036 | -2.026 | 1.199 | -1.632 |
13 | -0.083 | 0.59 | -0.183 | -0.815 |
14 | 0.161 | 0.24 | -0.591 | 0.0 |
15 | -1.35 | -0.456 | 0.73 | 0.031 |
16 | -0.521 | -0.665 | 0.883 | -0.746 |
17 | -0.431 | -0.372 | 0.873 | -1.32 |
18 | 0.33 | -0.798 | 0.545 | -0.834 |
19 | 0.031 | -0.066 | 0.595 | -1.517 |