Model info
| Transcription factor | Klf6 | ||||||||
| Model | KLF6_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvRGGGYGKRGvnbRSvv | ||||||||
| Best auROC (human) | 0.946 | ||||||||
| Best auROC (mouse) | 0.604 | ||||||||
| Peak sets in benchmark (human) | 16 | ||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 498 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors {2.3.1.2} | ||||||||
| MGI | MGI:1346318 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | KLF6_MOUSE | ||||||||
| UniProt AC | O08584 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Klf6 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 77.0 | 92.0 | 253.0 | 74.0 |
| 02 | 110.0 | 123.0 | 238.0 | 25.0 |
| 03 | 221.0 | 94.0 | 139.0 | 42.0 |
| 04 | 228.0 | 9.0 | 183.0 | 76.0 |
| 05 | 24.0 | 3.0 | 404.0 | 65.0 |
| 06 | 12.0 | 0.0 | 474.0 | 10.0 |
| 07 | 22.0 | 26.0 | 442.0 | 6.0 |
| 08 | 129.0 | 227.0 | 0.0 | 140.0 |
| 09 | 58.0 | 3.0 | 424.0 | 11.0 |
| 10 | 14.0 | 11.0 | 342.0 | 129.0 |
| 11 | 104.0 | 32.0 | 339.0 | 21.0 |
| 12 | 43.0 | 15.0 | 415.0 | 23.0 |
| 13 | 114.0 | 225.0 | 103.0 | 54.0 |
| 14 | 146.0 | 158.0 | 68.0 | 124.0 |
| 15 | 31.0 | 78.0 | 259.0 | 128.0 |
| 16 | 73.0 | 63.0 | 302.0 | 58.0 |
| 17 | 80.0 | 85.0 | 299.0 | 32.0 |
| 18 | 173.0 | 55.0 | 215.0 | 53.0 |
| 19 | 128.0 | 116.0 | 226.0 | 26.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.469 | -0.294 | 0.707 | -0.508 |
| 02 | -0.118 | -0.008 | 0.646 | -1.554 |
| 03 | 0.572 | -0.273 | 0.113 | -1.059 |
| 04 | 0.603 | -2.476 | 0.385 | -0.482 |
| 05 | -1.592 | -3.317 | 1.173 | -0.635 |
| 06 | -2.226 | -4.393 | 1.332 | -2.386 |
| 07 | -1.674 | -1.517 | 1.262 | -2.811 |
| 08 | 0.039 | 0.599 | -4.393 | 0.12 |
| 09 | -0.746 | -3.317 | 1.221 | -2.303 |
| 10 | -2.089 | -2.303 | 1.007 | 0.039 |
| 11 | -0.174 | -1.32 | 0.998 | -1.717 |
| 12 | -1.036 | -2.026 | 1.199 | -1.632 |
| 13 | -0.083 | 0.59 | -0.183 | -0.815 |
| 14 | 0.161 | 0.24 | -0.591 | 0.0 |
| 15 | -1.35 | -0.456 | 0.73 | 0.031 |
| 16 | -0.521 | -0.665 | 0.883 | -0.746 |
| 17 | -0.431 | -0.372 | 0.873 | -1.32 |
| 18 | 0.33 | -0.798 | 0.545 | -0.834 |
| 19 | 0.031 | -0.066 | 0.595 | -1.517 |