We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorKLF9
(GeneCards)
ModelKLF9_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
C
Motif rank
0
ConsensusSvvGKGGGCGTGKCb
Best auROC (human)0.954
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words256
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyKrüppel-like factors {2.3.1.2}
HGNCHGNC:1123
EntrezGeneGeneID:687
(SSTAR profile)
UniProt IDKLF9_HUMAN
UniProt ACQ13886
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.79966
0.0005 2.0770599999999995
0.0001 4.75441
GTEx tissue expression atlas KLF9 expression
ReMap ChIP-seq dataset list KLF9 datasets
Motifs in JASPAR
MA1107.1 (KLF9; Homo sapiens)
PCM
ACGT
0116.048.0163.029.0
0266.048.0118.024.0
03128.035.068.025.0
0441.03.0205.07.0
0511.01.0162.082.0
064.00.0252.00.0
070.01.0251.04.0
080.02.0254.00.0
092.0194.01.059.0
100.00.0256.00.0
111.04.067.0184.0
121.01.0250.04.0
1313.030.0172.041.0
144.0216.08.028.0
1533.0134.052.037.0
PWM
ACGT
01-1.325-0.2810.922-0.766
020.03-0.2810.602-0.946
030.682-0.5860.059-0.907
04-0.433-2.7021.149-2.054
05-1.664-3.3110.9160.243
06-2.496-3.8541.355-3.854
07-3.854-3.3111.351-2.496
08-3.854-2.9611.362-3.854
09-2.9611.095-3.311-0.08
10-3.854-3.8541.37-3.854
11-3.311-2.4960.0451.042
12-3.311-3.3111.347-2.496
13-1.514-0.7340.975-0.433
14-2.4961.201-1.941-0.8
15-0.6430.728-0.203-0.533