Model info
| Transcription factor | Maff | ||||||||
| Model | MAFF_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | TGCTGASTMA | ||||||||
| Best auROC (human) | 0.503 | ||||||||
| Best auROC (mouse) | 0.929 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 15 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Maf-related factors {1.1.3} | ||||||||
| TF subfamily | Small Maf factors {1.1.3.2} | ||||||||
| MGI | MGI:96910 | ||||||||
| EntrezGene | GeneID:17133 (SSTAR profile) | ||||||||
| UniProt ID | MAFF_MOUSE | ||||||||
| UniProt AC | O54791 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Maff expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 17.0 | 9.0 | 7.0 | 467.0 |
| 02 | 4.0 | 6.0 | 483.0 | 7.0 |
| 03 | 14.0 | 468.0 | 13.0 | 5.0 |
| 04 | 8.0 | 21.0 | 3.0 | 468.0 |
| 05 | 7.0 | 6.0 | 457.0 | 30.0 |
| 06 | 457.0 | 9.0 | 5.0 | 29.0 |
| 07 | 4.0 | 155.0 | 306.0 | 35.0 |
| 08 | 25.0 | 38.0 | 26.0 | 411.0 |
| 09 | 66.0 | 357.0 | 31.0 | 46.0 |
| 10 | 401.0 | 15.0 | 49.0 | 35.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.92 | -2.484 | -2.694 | 1.309 |
| 02 | -3.126 | -2.819 | 1.343 | -2.694 |
| 03 | -2.096 | 1.311 | -2.163 | -2.961 |
| 04 | -2.584 | -1.725 | -3.325 | 1.311 |
| 05 | -2.694 | -2.819 | 1.287 | -1.389 |
| 06 | 1.287 | -2.484 | -2.961 | -1.421 |
| 07 | -3.126 | 0.213 | 0.888 | -1.242 |
| 08 | -1.561 | -1.163 | -1.525 | 1.182 |
| 09 | -0.628 | 1.041 | -1.358 | -0.979 |
| 10 | 1.157 | -2.034 | -0.918 | -1.242 |