Transcription factor | MAF (GeneCards) | ||||||||
Model | MAF_HUMAN.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 19 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vdWdnTGCTGAbdhddvhd | ||||||||
Best auROC (human) | 0.853 | ||||||||
Best auROC (mouse) | 0.837 | ||||||||
Peak sets in benchmark (human) | 10 | ||||||||
Peak sets in benchmark (mouse) | 5 | ||||||||
Aligned words | 500 | ||||||||
TF family | Maf-related factors {1.1.3} | ||||||||
TF subfamily | Large Maf factors {1.1.3.1} | ||||||||
HGNC | HGNC:6776 | ||||||||
EntrezGene | GeneID:4094 (SSTAR profile) | ||||||||
UniProt ID | MAF_HUMAN | ||||||||
UniProt AC | O75444 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | MAF expression | ||||||||
ReMap ChIP-seq dataset list | MAF datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 153.0 | 118.0 | 167.0 | 62.0 |
02 | 235.0 | 71.0 | 101.0 | 93.0 |
03 | 294.0 | 42.0 | 39.0 | 125.0 |
04 | 196.0 | 44.0 | 59.0 | 201.0 |
05 | 77.0 | 156.0 | 135.0 | 132.0 |
06 | 55.0 | 20.0 | 13.0 | 412.0 |
07 | 9.0 | 7.0 | 480.0 | 4.0 |
08 | 62.0 | 428.0 | 3.0 | 7.0 |
09 | 32.0 | 3.0 | 6.0 | 459.0 |
10 | 9.0 | 3.0 | 451.0 | 37.0 |
11 | 441.0 | 12.0 | 34.0 | 13.0 |
12 | 51.0 | 223.0 | 164.0 | 62.0 |
13 | 119.0 | 59.0 | 77.0 | 245.0 |
14 | 121.0 | 206.0 | 60.0 | 113.0 |
15 | 237.0 | 56.0 | 77.0 | 130.0 |
16 | 97.0 | 36.0 | 288.0 | 79.0 |
17 | 80.0 | 256.0 | 109.0 | 55.0 |
18 | 231.0 | 118.0 | 73.0 | 78.0 |
19 | 201.0 | 76.0 | 117.0 | 106.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.2 | -0.057 | 0.287 | -0.689 |
02 | 0.626 | -0.556 | -0.21 | -0.291 |
03 | 0.848 | -1.067 | -1.138 | 0.0 |
04 | 0.445 | -1.022 | -0.737 | 0.47 |
05 | -0.477 | 0.219 | 0.076 | 0.054 |
06 | -0.805 | -1.77 | -2.163 | 1.184 |
07 | -2.484 | -2.694 | 1.336 | -3.126 |
08 | -0.689 | 1.222 | -3.325 | -2.694 |
09 | -1.328 | -3.325 | -2.819 | 1.292 |
10 | -2.484 | -3.325 | 1.274 | -1.189 |
11 | 1.252 | -2.234 | -1.27 | -2.163 |
12 | -0.879 | 0.573 | 0.269 | -0.689 |
13 | -0.049 | -0.737 | -0.477 | 0.667 |
14 | -0.032 | 0.495 | -0.721 | -0.1 |
15 | 0.634 | -0.788 | -0.477 | 0.039 |
16 | -0.25 | -1.215 | 0.828 | -0.452 |
17 | -0.439 | 0.711 | -0.135 | -0.805 |
18 | 0.608 | -0.057 | -0.529 | -0.464 |
19 | 0.47 | -0.49 | -0.065 | -0.163 |