We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMecp2
ModelMECP2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
C
Motif rank
0
ConsensusSCCGGAG
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words122
TF family
TF subfamily
MGIMGI:99918
EntrezGeneGeneID:17257
(SSTAR profile)
UniProt IDMECP2_MOUSE
UniProt ACQ9Z2D6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.99196
0.0005 3.1750800000000003
0.0001 4.768675
GTEx tissue expression atlas Mecp2 expression
Motifs in JASPAR
PCM
ACGT
012.96670.17642.4962.966
020.0118.6040.00.0
030.0118.6040.00.0
040.00.0118.6040.0
050.00.0118.6040.0
0668.2060.050.3990.0
0752.3880.066.2160.0
PWM
ACGT
01-2.0040.8390.348-2.004
02-3.2521.357-3.252-3.252
03-3.2521.357-3.252-3.252
04-3.252-3.2521.357-3.252
05-3.252-3.2521.357-3.252
060.811-3.2520.514-3.252
070.552-3.2520.782-3.252