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Model info
Transcription factorMEF2A
(GeneCards)
ModelMEF2A_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusndbYTATTTWWRKnn
Best auROC (human)0.95
Best auROC (mouse)0.981
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)6
Aligned words498
TF familyRegulators of differentiation {5.1.1}
TF subfamilyMEF-2 {5.1.1.1}
HGNCHGNC:6993
EntrezGeneGeneID:4205
(SSTAR profile)
UniProt IDMEF2A_HUMAN
UniProt ACQ02078
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.37801
0.0005 12.266560000000002
0.0001 16.163415
GTEx tissue expression atlas MEF2A expression
ReMap ChIP-seq dataset list MEF2A datasets
Motifs in JASPAR
MA0052.1 (MEF2A; Homo sapiens)
MA0052.2 (MEF2A; Homo sapiens)
MA0052.3 (MEF2A; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0127.012.051.040.025.06.08.049.043.016.048.052.021.06.037.056.0
0211.019.057.029.08.04.06.022.015.09.072.048.012.015.089.081.0
030.040.01.05.00.032.01.014.013.0167.07.037.04.0133.012.031.0
040.01.00.016.05.08.00.0359.00.01.00.020.00.08.00.079.0
054.00.00.01.017.00.01.00.00.00.00.00.0444.00.015.015.0
0641.04.02.0418.00.00.00.00.03.00.01.012.03.00.00.013.0
079.00.03.035.00.00.00.04.01.00.00.02.033.07.011.0392.0
080.00.00.043.00.00.00.07.00.00.00.014.024.012.04.0393.0
0911.04.01.08.01.00.00.011.00.00.00.04.086.044.03.0324.0
107.01.07.083.011.01.06.030.00.02.00.02.035.08.027.0277.0
1118.00.035.00.09.01.02.00.09.00.030.01.0281.04.0100.07.0
1246.018.0221.032.01.03.00.01.08.09.0122.028.00.02.02.04.0
1323.027.03.02.017.010.00.05.0121.0158.034.032.08.045.07.05.0
1465.036.036.032.057.081.014.088.05.08.07.024.012.08.09.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.138-0.9320.4910.25-0.214-1.594-1.3220.4510.322-0.6520.4310.51-0.386-1.5940.1730.584
02-1.016-0.4840.601-0.068-1.322-1.97-1.594-0.34-0.715-1.2090.8340.431-0.932-0.7151.0450.951
03-4.3950.25-3.121-1.764-4.3950.029-3.121-0.782-0.8541.672-1.4490.173-1.971.445-0.932-0.002
04-4.395-3.121-4.395-0.652-1.764-1.322-4.3952.436-4.395-3.121-4.395-0.433-4.395-1.322-4.3950.926
05-1.97-4.395-4.395-3.121-0.593-4.395-3.121-4.395-4.395-4.395-4.395-4.3952.648-4.395-0.715-0.715
060.275-1.97-2.5782.588-4.395-4.395-4.395-4.395-2.228-4.395-3.121-0.932-2.228-4.395-4.395-0.854
07-1.209-4.395-2.2280.118-4.395-4.395-4.395-1.97-3.121-4.395-4.395-2.5780.06-1.449-1.0162.524
08-4.395-4.395-4.3950.322-4.395-4.395-4.395-1.449-4.395-4.395-4.395-0.782-0.254-0.932-1.972.526
09-1.016-1.97-3.121-1.322-3.121-4.395-4.395-1.016-4.395-4.395-4.395-1.971.010.345-2.2282.334
10-1.449-3.121-1.4490.975-1.016-3.121-1.594-0.034-4.395-2.578-4.395-2.5780.118-1.322-0.1382.177
11-0.537-4.3950.118-4.395-1.209-3.121-2.578-4.395-1.209-4.395-0.034-3.1212.191-1.971.161-1.449
120.389-0.5371.9520.029-3.121-2.228-4.395-3.121-1.322-1.2091.359-0.102-4.395-2.578-2.578-1.97
13-0.296-0.138-2.228-2.578-0.593-1.108-4.395-1.7641.3511.6170.0890.029-1.3220.367-1.449-1.764
140.7320.1460.1460.0290.6010.951-0.7821.033-1.764-1.322-1.449-0.254-0.932-1.322-1.209-0.715