We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMEF2B
(GeneCards)
ModelMEF2B_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusnbWbYTRTWTbWRbnhnhn
Best auROC (human)0.962
Best auROC (mouse)
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)
Aligned words373
TF familyRegulators of differentiation {5.1.1}
TF subfamilyMEF-2 {5.1.1.1}
HGNCHGNC:6995
EntrezGeneGeneID:100271849; 4207
(SSTAR profile)
UniProt IDMEF2B_HUMAN
UniProt ACQ02080
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.795560000000002
0.0005 13.24421
0.0001 16.233110000000003
GTEx tissue expression atlas MEF2B expression
ReMap ChIP-seq dataset list MEF2B datasets
Motifs in JASPAR
MA0660.1 (MEF2B; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.09.026.028.014.020.03.021.022.031.016.070.09.014.026.040.0
0217.01.019.024.014.04.06.050.028.02.011.030.023.03.041.092.0
0313.08.039.022.05.02.01.02.08.014.023.032.014.043.049.090.0
040.034.00.06.03.053.02.09.03.068.07.034.02.0116.011.017.0
052.01.00.05.03.034.01.0233.01.01.00.018.02.04.01.059.0
066.00.02.00.021.02.05.012.01.00.01.00.0212.026.059.018.0
0717.05.01.0217.06.010.00.012.02.013.01.051.01.06.00.023.0
089.00.03.014.03.05.06.020.00.00.00.02.023.013.024.0243.0
091.03.00.031.00.01.00.017.03.04.04.022.09.024.00.0246.0
104.00.01.08.02.04.01.025.01.00.00.03.037.063.047.0169.0
1113.01.07.023.017.05.01.044.04.07.07.031.025.026.031.0123.0
1215.00.043.01.024.02.05.08.08.00.037.01.078.00.0131.012.0
1312.014.074.025.00.01.01.00.019.018.0121.058.01.04.012.05.0
148.014.03.07.013.011.00.013.067.068.025.048.023.019.025.021.0
1536.035.017.023.043.032.02.035.07.022.05.019.020.024.012.033.0
1630.030.029.017.045.030.05.033.09.015.05.07.016.037.020.037.0
1713.034.017.036.026.028.03.055.08.019.06.026.08.023.027.036.0
1818.04.024.09.033.015.03.053.012.011.019.011.025.022.056.050.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.348-0.9060.1290.202-0.478-0.129-1.929-0.081-0.0360.302-0.3481.11-0.906-0.4780.1290.555
02-0.289-2.829-0.180.05-0.478-1.669-1.2920.7760.202-2.281-0.7120.270.008-1.9290.5791.382
03-0.55-1.0190.53-0.036-1.463-2.281-2.829-2.281-1.019-0.4780.0080.334-0.4780.6260.7561.361
04-4.1410.394-4.141-1.292-1.9290.834-2.281-0.906-1.9291.082-1.1460.394-2.2811.613-0.712-0.289
05-2.281-2.829-4.141-1.463-1.9290.394-2.8292.309-2.829-2.829-4.141-0.233-2.281-1.669-2.8290.94
06-1.292-4.141-2.281-4.141-0.081-2.281-1.463-0.628-2.829-4.141-2.829-4.1412.2150.1290.94-0.233
07-0.289-1.463-2.8292.238-1.292-0.805-4.141-0.628-2.281-0.55-2.8290.796-2.829-1.292-4.1410.008
08-0.906-4.141-1.929-0.478-1.929-1.463-1.292-0.129-4.141-4.141-4.141-2.2810.008-0.550.052.351
09-2.829-1.929-4.1410.302-4.141-2.829-4.141-0.289-1.929-1.669-1.669-0.036-0.9060.05-4.1412.363
10-1.669-4.141-2.829-1.019-2.281-1.669-2.8290.09-2.829-4.141-4.141-1.9290.4771.0060.7151.989
11-0.55-2.829-1.1460.008-0.289-1.463-2.8290.649-1.669-1.146-1.1460.3020.090.1290.3021.672
12-0.411-4.1410.626-2.8290.05-2.281-1.463-1.019-1.019-4.1410.477-2.8291.218-4.1411.735-0.628
13-0.628-0.4781.1660.09-4.141-2.829-2.829-4.141-0.18-0.2331.6550.923-2.829-1.669-0.628-1.463
14-1.019-0.478-1.929-1.146-0.55-0.712-4.141-0.551.0671.0820.090.7360.008-0.180.09-0.081
150.450.422-0.2890.0080.6260.334-2.2810.422-1.146-0.036-1.463-0.18-0.1290.05-0.6280.364
160.270.270.237-0.2890.6710.27-1.4630.364-0.906-0.411-1.463-1.146-0.3480.477-0.1290.477
17-0.550.394-0.2890.450.1290.202-1.9290.871-1.019-0.18-1.2920.129-1.0190.0080.1660.45
18-0.233-1.6690.05-0.9060.364-0.411-1.9290.834-0.628-0.712-0.18-0.7120.09-0.0360.8890.776