Model info
| Transcription factor | MEF2B (GeneCards) | ||||||||
| Model | MEF2B_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ddddYTATTTWWRK | ||||||||
| Best auROC (human) | 0.946 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 23 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Regulators of differentiation {5.1.1} | ||||||||
| TF subfamily | MEF-2 {5.1.1.1} | ||||||||
| HGNC | HGNC:6995 | ||||||||
| EntrezGene | GeneID:100271849; 4207 (SSTAR profile) | ||||||||
| UniProt ID | MEF2B_HUMAN | ||||||||
| UniProt AC | Q02080 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MEF2B expression | ||||||||
| ReMap ChIP-seq dataset list | MEF2B datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 127.0 | 59.0 | 207.0 | 107.0 |
| 02 | 97.0 | 55.0 | 126.0 | 222.0 |
| 03 | 102.0 | 18.0 | 136.0 | 244.0 |
| 04 | 84.0 | 52.0 | 187.0 | 177.0 |
| 05 | 24.0 | 386.0 | 20.0 | 70.0 |
| 06 | 1.0 | 44.0 | 1.0 | 454.0 |
| 07 | 431.0 | 13.0 | 16.0 | 40.0 |
| 08 | 53.0 | 10.0 | 3.0 | 434.0 |
| 09 | 38.0 | 3.0 | 2.0 | 457.0 |
| 10 | 18.0 | 24.0 | 7.0 | 451.0 |
| 11 | 67.0 | 59.0 | 24.0 | 350.0 |
| 12 | 85.0 | 28.0 | 70.0 | 317.0 |
| 13 | 236.0 | 0.0 | 244.0 | 20.0 |
| 14 | 61.0 | 26.0 | 348.0 | 65.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.016 | -0.737 | 0.5 | -0.153 |
| 02 | -0.25 | -0.805 | 0.008 | 0.569 |
| 03 | -0.201 | -1.868 | 0.083 | 0.663 |
| 04 | -0.392 | -0.86 | 0.399 | 0.344 |
| 05 | -1.6 | 1.119 | -1.77 | -0.57 |
| 06 | -3.903 | -1.022 | -3.903 | 1.281 |
| 07 | 1.229 | -2.163 | -1.975 | -1.114 |
| 08 | -0.841 | -2.394 | -3.325 | 1.236 |
| 09 | -1.163 | -3.325 | -3.573 | 1.287 |
| 10 | -1.868 | -1.6 | -2.694 | 1.274 |
| 11 | -0.613 | -0.737 | -1.6 | 1.022 |
| 12 | -0.38 | -1.454 | -0.57 | 0.923 |
| 13 | 0.63 | -4.4 | 0.663 | -1.77 |
| 14 | -0.705 | -1.525 | 1.016 | -0.643 |