We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMEF2B
(GeneCards)
ModelMEF2B_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusddddYTATTTWWRK
Best auROC (human)0.946
Best auROC (mouse)
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)
Aligned words500
TF familyRegulators of differentiation {5.1.1}
TF subfamilyMEF-2 {5.1.1.1}
HGNCHGNC:6995
EntrezGeneGeneID:100271849; 4207
(SSTAR profile)
UniProt IDMEF2B_HUMAN
UniProt ACQ02080
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.755459999999999
0.0005 6.594710000000001
0.0001 8.306365
GTEx tissue expression atlas MEF2B expression
ReMap ChIP-seq dataset list MEF2B datasets
Motifs in JASPAR
MA0660.1 (MEF2B; Homo sapiens)
PCM
ACGT
01127.059.0207.0107.0
0297.055.0126.0222.0
03102.018.0136.0244.0
0484.052.0187.0177.0
0524.0386.020.070.0
061.044.01.0454.0
07431.013.016.040.0
0853.010.03.0434.0
0938.03.02.0457.0
1018.024.07.0451.0
1167.059.024.0350.0
1285.028.070.0317.0
13236.00.0244.020.0
1461.026.0348.065.0
PWM
ACGT
010.016-0.7370.5-0.153
02-0.25-0.8050.0080.569
03-0.201-1.8680.0830.663
04-0.392-0.860.3990.344
05-1.61.119-1.77-0.57
06-3.903-1.022-3.9031.281
071.229-2.163-1.975-1.114
08-0.841-2.394-3.3251.236
09-1.163-3.325-3.5731.287
10-1.868-1.6-2.6941.274
11-0.613-0.737-1.61.022
12-0.38-1.454-0.570.923
130.63-4.40.663-1.77
14-0.705-1.5251.016-0.643