Check the newest release v13
Model info
Transcription factorMEF2C
(GeneCards)
ModelMEF2C_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnddYTATTTWWRdhn
Best auROC (human)0.963
Best auROC (mouse)0.886
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)9
Aligned words496
TF familyRegulators of differentiation {5.1.1}
TF subfamilyMEF-2 {5.1.1.1}
HGNCHGNC:6996
EntrezGeneGeneID:4208
(SSTAR profile)
UniProt IDMEF2C_HUMAN
UniProt ACQ06413
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.98536
0.0005 12.79581
0.0001 16.53621
GTEx tissue expression atlas MEF2C expression
ReMap ChIP-seq dataset list MEF2C datasets
Motifs in JASPAR
MA0497.1 (MEF2C; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0139.02.056.035.029.09.08.040.036.014.034.050.023.07.043.071.0
0210.021.064.032.08.01.08.015.017.016.069.039.017.013.069.097.0
033.037.03.09.03.029.01.018.05.0132.015.058.08.0116.010.049.0
042.03.00.014.01.011.04.0298.00.02.00.027.01.09.00.0124.0
052.01.01.00.023.01.00.01.02.02.00.00.0433.04.018.08.0
0622.05.03.0430.02.02.01.03.01.00.02.016.00.00.00.09.0
075.01.00.019.00.01.00.06.01.01.00.04.042.04.02.0410.0
081.02.02.043.00.02.00.05.00.01.00.01.026.024.04.0385.0
097.01.00.019.03.04.02.020.01.02.02.01.079.037.04.0314.0
108.07.05.070.04.06.03.031.01.03.01.03.040.023.042.0249.0
1121.01.029.02.030.00.09.00.021.00.029.01.0224.06.0118.05.0
1280.015.0166.035.02.01.02.02.018.019.0115.033.03.00.03.02.0
1350.035.05.013.010.013.00.012.0117.0100.030.039.020.035.010.07.0
1483.040.042.032.053.055.015.060.015.011.07.012.015.014.010.032.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.227-2.5760.5860.12-0.066-1.207-1.320.2520.148-0.780.0910.473-0.294-1.4470.3240.822
02-1.106-0.3840.7190.031-1.32-3.119-1.32-0.713-0.591-0.650.7930.227-0.591-0.8520.7931.132
03-2.2260.175-2.226-1.207-2.226-0.066-3.119-0.535-1.7621.439-0.7130.621-1.321.311-1.1060.453
04-2.576-2.226-4.393-0.78-3.119-1.014-1.9682.252-4.393-2.576-4.393-0.136-3.119-1.207-4.3931.377
05-2.576-3.119-3.119-4.393-0.294-3.119-4.393-3.119-2.576-2.576-4.393-4.3932.625-1.968-0.535-1.32
06-0.338-1.762-2.2262.618-2.576-2.576-3.119-2.226-3.119-4.393-2.576-0.65-4.393-4.393-4.393-1.207
07-1.762-3.119-4.393-0.482-4.393-3.119-4.393-1.592-3.119-3.119-4.393-1.9680.3-1.968-2.5762.571
08-3.119-2.576-2.5760.324-4.393-2.576-4.393-1.762-4.393-3.119-4.393-3.119-0.174-0.252-1.9682.508
09-1.447-3.119-4.393-0.482-2.226-1.968-2.576-0.431-3.119-2.576-2.576-3.1190.9280.175-1.9682.304
10-1.32-1.447-1.7620.808-1.968-1.592-2.2260.0-3.119-2.226-3.119-2.2260.252-0.2940.32.073
11-0.384-3.119-0.066-2.576-0.032-4.393-1.207-4.393-0.384-4.393-0.066-3.1191.967-1.5921.328-1.762
120.94-0.7131.6680.12-2.576-3.119-2.576-2.576-0.535-0.4821.3020.062-2.226-4.393-2.226-2.576
130.4730.12-1.762-0.852-1.106-0.852-4.393-0.931.3191.163-0.0320.227-0.4310.12-1.106-1.447
140.9770.2520.30.0310.5310.568-0.7130.654-0.713-1.014-1.447-0.93-0.713-0.78-1.1060.031