We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMEF2D
(GeneCards)
ModelMEF2D_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnddYTATTTWTARhh
Best auROC (human)0.845
Best auROC (mouse)0.974
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words498
TF familyRegulators of differentiation {5.1.1}
TF subfamilyMEF-2 {5.1.1.1}
HGNCHGNC:6997
EntrezGeneGeneID:4209
(SSTAR profile)
UniProt IDMEF2D_HUMAN
UniProt ACQ14814
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.28001
0.0005 11.400660000000002
0.0001 15.76581
GTEx tissue expression atlas MEF2D expression
ReMap ChIP-seq dataset list MEF2D datasets
Motifs in JASPAR
MA0773.1 (MEF2D; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0134.07.043.030.026.07.06.030.060.012.045.054.032.06.060.045.0
0211.08.088.045.03.05.011.013.011.09.079.055.015.015.059.070.0
031.030.05.04.03.028.00.06.06.0177.014.040.04.0145.08.026.0
040.01.00.013.00.05.00.0375.00.00.01.026.00.00.01.075.0
050.00.00.00.05.00.00.01.02.00.00.00.0476.00.02.011.0
0632.00.01.0450.00.00.00.00.00.01.00.01.01.00.00.011.0
0710.00.01.022.00.00.01.00.01.00.00.00.026.08.04.0424.0
080.00.00.037.00.00.01.07.00.00.00.06.042.015.03.0386.0
0923.00.00.019.01.05.00.09.01.01.00.02.0128.036.06.0266.0
109.01.02.0141.05.03.03.031.00.00.01.05.025.04.018.0249.0
1117.00.022.00.06.01.01.00.07.00.017.00.0346.00.076.04.0
1242.012.0297.025.01.00.00.00.04.05.090.017.00.01.01.02.0
1313.021.04.09.04.07.00.07.0124.0179.029.056.07.027.02.08.0
1458.029.022.039.063.069.05.097.012.010.04.09.021.031.015.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.089-1.4490.322-0.034-0.176-1.449-1.594-0.0340.652-0.9320.3670.5480.029-1.5940.6520.367
02-1.016-1.3221.0330.367-2.228-1.764-1.016-0.854-1.016-1.2090.9260.566-0.715-0.7150.6360.806
03-3.121-0.034-1.764-1.97-2.228-0.102-4.395-1.594-1.5941.73-0.7820.25-1.971.531-1.322-0.176
04-4.395-3.121-4.395-0.854-4.395-1.764-4.3952.48-4.395-4.395-3.121-0.176-4.395-4.395-3.1210.874
05-4.395-4.395-4.395-4.395-1.764-4.395-4.395-3.121-2.578-4.395-4.395-4.3952.718-4.395-2.578-1.016
060.029-4.395-3.1212.662-4.395-4.395-4.395-4.395-4.395-3.121-4.395-3.121-3.121-4.395-4.395-1.016
07-1.108-4.395-3.121-0.34-4.395-4.395-3.121-4.395-3.121-4.395-4.395-4.395-0.176-1.322-1.972.602
08-4.395-4.395-4.3950.173-4.395-4.395-3.121-1.449-4.395-4.395-4.395-1.5940.298-0.715-2.2282.508
09-0.296-4.395-4.395-0.484-3.121-1.764-4.395-1.209-3.121-3.121-4.395-2.5781.4070.146-1.5942.137
10-1.209-3.121-2.5781.503-1.764-2.228-2.228-0.002-4.395-4.395-3.121-1.764-0.214-1.97-0.5372.071
11-0.593-4.395-0.34-4.395-1.594-3.121-3.121-4.395-1.449-4.395-0.593-4.3952.399-4.3950.887-1.97
120.298-0.9322.247-0.214-3.121-4.395-4.395-4.395-1.97-1.7641.056-0.593-4.395-3.121-3.121-2.578
13-0.854-0.386-1.97-1.209-1.97-1.449-4.395-1.4491.3751.741-0.0680.584-1.449-0.138-2.578-1.322
140.619-0.068-0.340.2250.7010.791-1.7641.13-0.932-1.108-1.97-1.209-0.386-0.002-0.715-0.854