We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusndTGAYTdATKdbn
Best auROC (human)0.848
Best auROC (mouse)0.952
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words500
TF familyTALE-type homeo domain factors {3.1.4}
TF subfamilyMEIS {3.1.4.2}
MGIMGI:104717
EntrezGeneGeneID:17268
(SSTAR profile)
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.69866
0.0005 12.423210000000001
0.0001 15.849720000000001
GTEx tissue expression atlas Meis1 expression
Motifs in JASPAR
MA0498.1 (Meis1; Mus musculus)
MA0498.2 (MEIS1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0146.017.055.05.058.011.09.032.078.07.023.021.046.012.040.038.0
0250.00.05.0173.05.00.00.042.016.00.04.0107.06.00.01.089.0
039.00.067.01.00.00.00.00.05.00.05.00.031.00.0373.07.0
0441.00.00.04.00.00.00.00.0444.01.00.00.06.01.01.00.0
0523.045.032.0391.00.00.00.02.00.00.00.01.00.00.00.04.0
063.00.03.017.021.00.02.022.03.01.01.027.041.03.029.0325.0
0734.02.013.019.01.01.00.02.09.01.018.07.054.015.083.0239.0
0896.01.01.00.017.01.01.00.0112.00.02.00.0245.08.014.00.0
0930.038.014.0388.05.00.01.04.00.02.00.016.00.00.00.00.0
103.01.021.010.014.01.08.017.01.00.04.010.045.010.0246.0107.0
1111.05.038.09.05.02.03.02.0109.016.090.064.036.010.068.030.0
1218.076.035.032.09.011.01.012.017.084.056.042.08.041.031.025.0
135.018.016.013.057.058.08.089.019.042.026.036.016.026.038.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.387-0.5950.564-1.7660.617-1.018-1.2110.0270.911-1.451-0.298-0.3880.387-0.9340.2480.197
020.469-4.397-1.7661.705-1.766-4.397-4.3970.296-0.654-4.397-1.9711.226-1.596-4.397-3.1221.043
03-1.211-4.3970.76-3.122-4.397-4.397-4.397-4.397-1.766-4.397-1.766-4.397-0.004-4.3972.472-1.451
040.273-4.397-4.397-1.971-4.397-4.397-4.397-4.3972.646-3.122-4.397-4.397-1.596-3.122-3.122-4.397
05-0.2980.3650.0272.519-4.397-4.397-4.397-2.58-4.397-4.397-4.397-3.122-4.397-4.397-4.397-1.971
06-2.23-4.397-2.23-0.595-0.388-4.397-2.58-0.342-2.23-3.122-3.122-0.140.273-2.23-0.072.335
070.087-2.58-0.856-0.486-3.122-3.122-4.397-2.58-1.211-3.122-0.539-1.4510.546-0.7170.9732.028
081.118-3.122-3.122-4.397-0.595-3.122-3.122-4.3971.272-4.397-2.58-4.3972.052-1.324-0.784-4.397
09-0.0360.197-0.7842.512-1.766-4.397-3.122-1.971-4.397-2.58-4.397-0.654-4.397-4.397-4.397-4.397
10-2.23-3.122-0.388-1.11-0.784-3.122-1.324-0.595-3.122-4.397-1.971-1.110.365-1.112.0571.226
11-1.018-1.7660.197-1.211-1.766-2.58-2.23-2.581.244-0.6541.0540.7150.144-1.110.775-0.036
12-0.5390.8850.1160.027-1.211-1.018-3.122-0.934-0.5950.9850.5820.296-1.3240.273-0.004-0.216
13-1.766-0.539-0.654-0.8560.5990.617-1.3241.043-0.4860.296-0.1770.144-0.654-0.1770.197-0.004