Check the newest release v12
Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdTGATWdATddb
Best auROC (human)0.816
Best auROC (mouse)0.945
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words499
TF familyTALE-type homeo domain factors {3.1.4}
TF subfamilyMEIS {3.1.4.2}
MGIMGI:104717
EntrezGeneGeneID:17268
(SSTAR profile)
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.34746
0.0005 6.1891099999999994
0.0001 7.959764999999999
GTEx tissue expression atlas Meis1 expression
Motifs in JASPAR
MA0498.1 (Meis1; Mus musculus)
MA0498.2 (MEIS1; Homo sapiens)
PCM
ACGT
01220.063.0126.090.0
0294.01.08.0396.0
0337.010.0441.011.0
04489.03.03.04.0
0516.019.019.0445.0
0664.05.053.0377.0
0796.016.0130.0257.0
08487.02.08.02.0
0917.035.015.0432.0
1077.022.0265.0135.0
11152.032.0222.093.0
1262.0187.0128.0122.0
PWM
ACGT
010.562-0.6710.01-0.322
02-0.279-3.901-2.5821.147
03-1.187-2.3921.254-2.309
041.357-3.323-3.323-3.124
05-1.973-1.816-1.8161.263
06-0.656-2.959-0.841.098
07-0.258-1.9730.0410.716
081.353-3.571-2.582-3.571
09-1.918-1.24-2.0321.233
10-0.475-1.6790.7470.078
110.195-1.3260.571-0.29
12-0.6870.4010.025-0.022