Model info
| Transcription factor | Meis2 | ||||||||
| Model | MEIS2_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 13 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hTGACAGbTKTbv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 413 | ||||||||
| TF family | TALE-type homeo domain factors {3.1.4} | ||||||||
| TF subfamily | MEIS {3.1.4.2} | ||||||||
| MGI | MGI:108564 | ||||||||
| EntrezGene | GeneID:17536 (SSTAR profile) | ||||||||
| UniProt ID | MEIS2_MOUSE | ||||||||
| UniProt AC | P97367 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Meis2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 91.704 | 61.775 | 55.011 | 252.049 |
| 02 | 0.0 | 0.0 | 0.0 | 460.539 |
| 03 | 0.0 | 0.0 | 460.539 | 0.0 |
| 04 | 402.417 | 0.0 | 0.0 | 58.122 |
| 05 | 0.0 | 460.539 | 0.0 | 0.0 |
| 06 | 460.539 | 0.0 | 0.0 | 0.0 |
| 07 | 9.169 | 57.18 | 364.764 | 29.426 |
| 08 | 39.739 | 189.648 | 122.69 | 108.461 |
| 09 | 0.611 | 6.584 | 0.0 | 453.344 |
| 10 | 4.882 | 4.045 | 313.408 | 138.205 |
| 11 | 9.58 | 8.218 | 70.469 | 372.27 |
| 12 | 23.435 | 256.959 | 79.239 | 100.906 |
| 13 | 209.429 | 156.385 | 50.165 | 44.56 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.224 | -0.611 | -0.724 | 0.776 |
| 02 | -4.332 | -4.332 | -4.332 | 1.376 |
| 03 | -4.332 | -4.332 | 1.376 | -4.332 |
| 04 | 1.242 | -4.332 | -4.332 | -0.671 |
| 05 | -4.332 | 1.376 | -4.332 | -4.332 |
| 06 | 1.376 | -4.332 | -4.332 | -4.332 |
| 07 | -2.389 | -0.687 | 1.144 | -1.327 |
| 08 | -1.039 | 0.494 | 0.063 | -0.059 |
| 09 | -3.997 | -2.665 | -4.332 | 1.361 |
| 10 | -2.901 | -3.04 | 0.993 | 0.18 |
| 11 | -2.351 | -2.482 | -0.483 | 1.164 |
| 12 | -1.542 | 0.796 | -0.368 | -0.13 |
| 13 | 0.592 | 0.303 | -0.814 | -0.929 |