We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMEIS3
(GeneCards)
ModelMEIS3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusndTGACAKvYd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10453
TF familyTALE-type homeo domain factors {3.1.4}
TF subfamilyMEIS {3.1.4.2}
HGNCHGNC:29537
EntrezGeneGeneID:56917
(SSTAR profile)
UniProt IDMEIS3_HUMAN
UniProt ACQ99687
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.47014
0.0005 5.841565
0.0001 7.979395
GTEx tissue expression atlas MEIS3 expression
ReMap ChIP-seq dataset list MEIS3 datasets
Motifs in JASPAR
PCM
ACGT
012342.2231720.8342326.0573509.351
022103.5081278.362172.3854344.211
03103.22672.62790.8729631.74
047.3859.7029876.315.068
059732.3153.065157.9925.091
066.9519877.2274.6349.652
079774.2370.579117.7595.889
08574.152669.8977585.5481068.866
091105.7733390.4154531.818870.458
101044.8941422.158840.8956590.518
111655.6181568.0714075.5862599.19
PWM
ACGT
01-0.055-0.363-0.0620.349
02-0.162-0.66-0.130.562
03-3.156-3.498-3.281.358
04-5.544-5.331.383-5.818
051.369-6.135-2.738-5.814
06-5.591.383-5.878-5.334
071.373-6.757-3.027-5.712
08-1.458-1.3041.12-0.838
09-0.8040.3150.605-1.043
10-0.861-0.553-1.0780.979
11-0.401-0.4560.4990.049