Model info
| Transcription factor | MEIS3 (GeneCards) | ||||||||
| Model | MEIS3_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ndTGACAKvYd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 10453 | ||||||||
| TF family | TALE-type homeo domain factors {3.1.4} | ||||||||
| TF subfamily | MEIS {3.1.4.2} | ||||||||
| HGNC | HGNC:29537 | ||||||||
| EntrezGene | GeneID:56917 (SSTAR profile) | ||||||||
| UniProt ID | MEIS3_HUMAN | ||||||||
| UniProt AC | Q99687 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MEIS3 expression | ||||||||
| ReMap ChIP-seq dataset list | MEIS3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2342.223 | 1720.834 | 2326.057 | 3509.351 |
| 02 | 2103.508 | 1278.36 | 2172.385 | 4344.211 |
| 03 | 103.226 | 72.627 | 90.872 | 9631.74 |
| 04 | 7.385 | 9.702 | 9876.31 | 5.068 |
| 05 | 9732.315 | 3.065 | 157.992 | 5.091 |
| 06 | 6.951 | 9877.227 | 4.634 | 9.652 |
| 07 | 9774.237 | 0.579 | 117.759 | 5.889 |
| 08 | 574.152 | 669.897 | 7585.548 | 1068.866 |
| 09 | 1105.773 | 3390.415 | 4531.818 | 870.458 |
| 10 | 1044.894 | 1422.158 | 840.895 | 6590.518 |
| 11 | 1655.618 | 1568.071 | 4075.586 | 2599.19 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.055 | -0.363 | -0.062 | 0.349 |
| 02 | -0.162 | -0.66 | -0.13 | 0.562 |
| 03 | -3.156 | -3.498 | -3.28 | 1.358 |
| 04 | -5.544 | -5.33 | 1.383 | -5.818 |
| 05 | 1.369 | -6.135 | -2.738 | -5.814 |
| 06 | -5.59 | 1.383 | -5.878 | -5.334 |
| 07 | 1.373 | -6.757 | -3.027 | -5.712 |
| 08 | -1.458 | -1.304 | 1.12 | -0.838 |
| 09 | -0.804 | 0.315 | 0.605 | -1.043 |
| 10 | -0.861 | -0.553 | -1.078 | 0.979 |
| 11 | -0.401 | -0.456 | 0.499 | 0.049 |