We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMESP1
(GeneCards)
ModelMESP1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnCAGGTGbdnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words61
TF familyTal-related factors {1.2.3}
TF subfamilyMesp-like factors {1.2.3.3}
HGNCHGNC:29658
EntrezGeneGeneID:55897
(SSTAR profile)
UniProt IDMESP1_HUMAN
UniProt ACQ9BRJ9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.963815
0.0005 5.628869999999999
0.0001 7.272645000000001
GTEx tissue expression atlas MESP1 expression
ReMap ChIP-seq dataset list MESP1 datasets
Motifs in JASPAR
PCM
ACGT
0117.2517.2520.255.25
024.551.52.51.5
0350.03.03.04.0
041.50.554.53.5
050.00.059.01.0
060.250.253.2556.25
072.251.2555.251.25
086.257.2522.2524.25
099.757.7524.7517.75
108.518.519.513.5
1120.58.516.514.5
PWM
ACGT
010.1310.1310.283-0.938
02-1.0651.187-1.515-1.848
031.158-1.382-1.382-1.16
04-1.848-2.3531.243-1.265
05-2.751-2.7511.321-2.069
06-2.532-2.532-1.3221.274
07-1.588-1.9531.256-1.953
08-0.79-0.6610.3730.456
09-0.397-0.6020.4750.158
10-0.520.1980.248-0.098
110.295-0.520.089-0.032