We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMIXL1
(GeneCards)
ModelMIXL1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusvbTAATTvvdn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words220
TF familyPaired-related HD factors {3.1.3}
TF subfamilyMIX {3.1.3.14}
HGNCHGNC:13363
EntrezGeneGeneID:83881
(SSTAR profile)
UniProt IDMIXL1_HUMAN
UniProt ACQ9H2W2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.604035
0.0005 6.430725000000001
0.0001 7.92142
GTEx tissue expression atlas MIXL1 expression
ReMap ChIP-seq dataset list MIXL1 datasets
Motifs in JASPAR
PCM
ACGT
0140.2529.25130.2520.25
0226.558.546.588.5
036.05.05.0204.0
04209.250.258.252.25
05216.03.01.00.0
060.00.01.0219.0
072.012.06.0200.0
08115.530.548.525.5
0976.030.097.017.0
10119.028.041.032.0
1119.2540.2540.25120.25
PWM
ACGT
01-0.303-0.6110.848-0.959
02-0.7050.06-0.1640.467
03-2.037-2.183-2.1831.293
041.318-3.563-1.77-2.751
051.35-2.562-3.178-3.733
06-3.733-3.733-3.1781.364
07-2.823-1.44-2.0371.273
080.729-0.571-0.123-0.741
090.317-0.5860.557-1.122
100.759-0.652-0.286-0.525
11-1.006-0.303-0.3030.769