Model info
| Transcription factor | MIXL1 (GeneCards) | ||||||||
| Model | MIXL1_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vbTAATTvvdn | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 220 | ||||||||
| TF family | Paired-related HD factors {3.1.3} | ||||||||
| TF subfamily | MIX {3.1.3.14} | ||||||||
| HGNC | HGNC:13363 | ||||||||
| EntrezGene | GeneID:83881 (SSTAR profile) | ||||||||
| UniProt ID | MIXL1_HUMAN | ||||||||
| UniProt AC | Q9H2W2 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MIXL1 expression | ||||||||
| ReMap ChIP-seq dataset list | MIXL1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.25 | 29.25 | 130.25 | 20.25 |
| 02 | 26.5 | 58.5 | 46.5 | 88.5 |
| 03 | 6.0 | 5.0 | 5.0 | 204.0 |
| 04 | 209.25 | 0.25 | 8.25 | 2.25 |
| 05 | 216.0 | 3.0 | 1.0 | 0.0 |
| 06 | 0.0 | 0.0 | 1.0 | 219.0 |
| 07 | 2.0 | 12.0 | 6.0 | 200.0 |
| 08 | 115.5 | 30.5 | 48.5 | 25.5 |
| 09 | 76.0 | 30.0 | 97.0 | 17.0 |
| 10 | 119.0 | 28.0 | 41.0 | 32.0 |
| 11 | 19.25 | 40.25 | 40.25 | 120.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.303 | -0.611 | 0.848 | -0.959 |
| 02 | -0.705 | 0.06 | -0.164 | 0.467 |
| 03 | -2.037 | -2.183 | -2.183 | 1.293 |
| 04 | 1.318 | -3.563 | -1.77 | -2.751 |
| 05 | 1.35 | -2.562 | -3.178 | -3.733 |
| 06 | -3.733 | -3.733 | -3.178 | 1.364 |
| 07 | -2.823 | -1.44 | -2.037 | 1.273 |
| 08 | 0.729 | -0.571 | -0.123 | -0.741 |
| 09 | 0.317 | -0.586 | 0.557 | -1.122 |
| 10 | 0.759 | -0.652 | -0.286 | -0.525 |
| 11 | -1.006 | -0.303 | -0.303 | 0.769 |