Model info
| Transcription factor | MTF1 (GeneCards) | ||||||||
| Model | MTF1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 17 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vGKRMCGKGTGCAdMdb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 33 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | MTF1-like factors {2.3.3.24} | ||||||||
| HGNC | HGNC:7428 | ||||||||
| EntrezGene | GeneID:4520 (SSTAR profile) | ||||||||
| UniProt ID | MTF1_HUMAN | ||||||||
| UniProt AC | Q14872 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MTF1 expression | ||||||||
| ReMap ChIP-seq dataset list | MTF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 15.422 | 12.053 | 3.873 | 3.681 |
| 02 | 4.715 | 2.31 | 28.004 | 0.0 |
| 03 | 3.272 | 0.962 | 13.28 | 17.515 |
| 04 | 7.506 | 5.967 | 20.883 | 0.674 |
| 05 | 7.603 | 18.958 | 1.54 | 6.929 |
| 06 | 2.983 | 29.64 | 0.866 | 1.54 |
| 07 | 0.0 | 0.0 | 35.029 | 0.0 |
| 08 | 3.368 | 0.866 | 4.523 | 26.272 |
| 09 | 0.0 | 0.962 | 34.067 | 0.0 |
| 10 | 0.0 | 11.452 | 0.0 | 23.577 |
| 11 | 0.0 | 0.0 | 35.029 | 0.0 |
| 12 | 0.0 | 34.163 | 0.0 | 0.866 |
| 13 | 35.029 | 0.0 | 0.0 | 0.0 |
| 14 | 18.669 | 4.331 | 6.255 | 5.774 |
| 15 | 22.134 | 9.527 | 1.828 | 1.54 |
| 16 | 14.339 | 3.657 | 10.297 | 6.736 |
| 17 | 4.186 | 15.253 | 10.923 | 4.667 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.525 | 0.294 | -0.706 | -0.747 |
| 02 | -0.543 | -1.104 | 1.097 | -2.384 |
| 03 | -0.841 | -1.651 | 0.385 | 0.646 |
| 04 | -0.139 | -0.342 | 0.814 | -1.82 |
| 05 | -0.128 | 0.721 | -1.379 | -0.21 |
| 06 | -0.913 | 1.152 | -1.704 | -1.379 |
| 07 | -2.384 | -2.384 | 1.315 | -2.384 |
| 08 | -0.818 | -1.704 | -0.578 | 1.035 |
| 09 | -2.384 | -1.651 | 1.288 | -2.384 |
| 10 | -2.384 | 0.246 | -2.384 | 0.931 |
| 11 | -2.384 | -2.384 | 1.315 | -2.384 |
| 12 | -2.384 | 1.29 | -2.384 | -1.704 |
| 13 | 1.315 | -2.384 | -2.384 | -2.384 |
| 14 | 0.707 | -0.614 | -0.3 | -0.37 |
| 15 | 0.87 | 0.077 | -1.267 | -1.379 |
| 16 | 0.457 | -0.752 | 0.148 | -0.235 |
| 17 | -0.642 | 0.515 | 0.203 | -0.552 |