We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMTF1
(GeneCards)
ModelMTF1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
C
Motif rank
0
ConsensusvGKRMCGKGTGCAdMdb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words33
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyMTF1-like factors {2.3.3.24}
HGNCHGNC:7428
EntrezGeneGeneID:4520
(SSTAR profile)
UniProt IDMTF1_HUMAN
UniProt ACQ14872
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.8010099999999998
0.0005 3.7633599999999996
0.0001 5.795109999999999
GTEx tissue expression atlas MTF1 expression
ReMap ChIP-seq dataset list MTF1 datasets
Motifs in JASPAR
PCM
ACGT
0115.42212.0533.8733.681
024.7152.3128.0040.0
033.2720.96213.2817.515
047.5065.96720.8830.674
057.60318.9581.546.929
062.98329.640.8661.54
070.00.035.0290.0
083.3680.8664.52326.272
090.00.96234.0670.0
100.011.4520.023.577
110.00.035.0290.0
120.034.1630.00.866
1335.0290.00.00.0
1418.6694.3316.2555.774
1522.1349.5271.8281.54
1614.3393.65710.2976.736
174.18615.25310.9234.667
PWM
ACGT
010.5250.294-0.706-0.747
02-0.543-1.1041.097-2.384
03-0.841-1.6510.3850.646
04-0.139-0.3420.814-1.82
05-0.1280.721-1.379-0.21
06-0.9131.152-1.704-1.379
07-2.384-2.3841.315-2.384
08-0.818-1.704-0.5781.035
09-2.384-1.6511.288-2.384
10-2.3840.246-2.3840.931
11-2.384-2.3841.315-2.384
12-2.3841.29-2.384-1.704
131.315-2.384-2.384-2.384
140.707-0.614-0.3-0.37
150.870.077-1.267-1.379
160.457-0.7520.148-0.235
17-0.6420.5150.203-0.552