MTF1_MOUSE.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

Model

MTF1_MOUSE.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

17

Quality

C

Motif rank

0

Consensus

vGKRMCGKGTGCAdMdb

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

33

TF family

More than 3 adjacent zinc finger factors {2.3.3}

TF subfamily

MTF1-like factors {2.3.3.24}

MGI

EntrezGene

GeneID:17764
(SSTAR profile)

UniProt ID

UniProt AC

Q07243
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	2.83366
0.0005	3.79086
0.0001	5.8110599999999994

GTEx tissue expression atlas

Mtf1 expression

Motifs in JASPAR

MA0863.1 (MTF1; Homo sapiens)

PCM

	A	C	G	T
01	15.422	12.053	3.873	3.681
02	4.715	2.31	28.004	0.0
03	3.272	0.962	13.28	17.515
04	7.506	5.967	20.883	0.674
05	7.603	18.958	1.54	6.929
06	2.983	29.64	0.866	1.54
07	0.0	0.0	35.029	0.0
08	3.368	0.866	4.523	26.272
09	0.0	0.962	34.067	0.0
10	0.0	11.452	0.0	23.577
11	0.0	0.0	35.029	0.0
12	0.0	34.163	0.0	0.866
13	35.029	0.0	0.0	0.0
14	18.669	4.331	6.255	5.774
15	22.134	9.527	1.828	1.54
16	14.339	3.657	10.297	6.736
17	4.186	15.253	10.923	4.667

PWM

	A	C	G	T
01	0.525	0.294	-0.706	-0.747
02	-0.543	-1.104	1.097	-2.384
03	-0.841	-1.651	0.385	0.646
04	-0.139	-0.342	0.814	-1.82
05	-0.128	0.721	-1.379	-0.21
06	-0.913	1.152	-1.704	-1.379
07	-2.384	-2.384	1.315	-2.384
08	-0.818	-1.704	-0.578	1.035
09	-2.384	-1.651	1.288	-2.384
10	-2.384	0.246	-2.384	0.931
11	-2.384	-2.384	1.315	-2.384
12	-2.384	1.29	-2.384	-1.704
13	1.315	-2.384	-2.384	-2.384
14	0.707	-0.614	-0.3	-0.37
15	0.87	0.077	-1.267	-1.379
16	0.457	-0.752	0.148	-0.235
17	-0.642	0.515	0.203	-0.552