We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMXI1
(GeneCards)
ModelMXI1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length15
Quality
A
Motif rank
0
ConsensusvCACRYGKvnSbbbv
Best auROC (human)0.878
Best auROC (mouse)0.973
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)5
Aligned words500
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyMad-like factors {1.2.6.7}
HGNCHGNC:7534
EntrezGeneGeneID:4601
(SSTAR profile)
UniProt IDMXI1_HUMAN
UniProt ACP50539
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.38646
0.0005 4.2592099999999995
0.0001 5.95326
GTEx tissue expression atlas MXI1 expression
ReMap ChIP-seq dataset list MXI1 datasets
Motifs in JASPAR
PCM
ACGT
01114.556151.216196.96137.267
022.106484.01412.9060.974
03482.3630.8314.9381.869
0411.008445.37333.0410.579
0586.48932.88375.9134.717
0633.33147.19921.118398.353
073.9010.0492.963.139
0830.53485.959297.31586.192
0959.518195.92185.58858.974
1099.152119.94142.436138.472
1116.756116.062282.82784.355
1259.325195.978160.04384.653
1369.553152.597181.48596.364
1481.704108.74225.80783.748
1589.487153.554206.68850.271
PWM
ACGT
01-0.0860.1880.45-1.182
02-3.5431.345-2.169-3.913
031.341-3.972-2.038-3.61
04-2.311.262-1.297-2.345
05-0.363-1.3021.093-3.005
06-1.289-0.954-1.721.151
07-3.144-4.41.363-3.295
08-1.372-0.3690.859-0.366
09-0.7290.4450.391-0.738
10-0.228-0.0410.1290.101
11-1.933-0.0730.81-0.387
12-0.7320.4450.244-0.384
13-0.5760.1970.369-0.257
14-0.419-0.1380.586-0.394
15-0.3290.2030.498-0.893