Model info
| Transcription factor | MXI1 (GeneCards) | ||||||||
| Model | MXI1_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | SMCACRTGbhb | ||||||||
| Best auROC (human) | 0.871 | ||||||||
| Best auROC (mouse) | 0.96 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | Mad-like factors {1.2.6.7} | ||||||||
| HGNC | HGNC:7534 | ||||||||
| EntrezGene | GeneID:4601 (SSTAR profile) | ||||||||
| UniProt ID | MXI1_HUMAN | ||||||||
| UniProt AC | P50539 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MXI1 expression | ||||||||
| ReMap ChIP-seq dataset list | MXI1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 31.0 | 278.0 | 141.0 | 50.0 |
| 02 | 113.0 | 301.0 | 60.0 | 26.0 |
| 03 | 9.0 | 482.0 | 8.0 | 1.0 |
| 04 | 447.0 | 8.0 | 25.0 | 20.0 |
| 05 | 7.0 | 423.0 | 28.0 | 42.0 |
| 06 | 48.0 | 39.0 | 376.0 | 37.0 |
| 07 | 19.0 | 64.0 | 3.0 | 414.0 |
| 08 | 1.0 | 29.0 | 462.0 | 8.0 |
| 09 | 53.0 | 231.0 | 135.0 | 81.0 |
| 10 | 80.0 | 160.0 | 17.0 | 243.0 |
| 11 | 45.0 | 189.0 | 111.0 | 155.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.358 | 0.793 | 0.119 | -0.898 |
| 02 | -0.1 | 0.872 | -0.721 | -1.525 |
| 03 | -2.484 | 1.34 | -2.584 | -3.903 |
| 04 | 1.265 | -2.584 | -1.561 | -1.77 |
| 05 | -2.694 | 1.21 | -1.454 | -1.067 |
| 06 | -0.938 | -1.138 | 1.093 | -1.189 |
| 07 | -1.818 | -0.658 | -3.325 | 1.189 |
| 08 | -3.903 | -1.421 | 1.298 | -2.584 |
| 09 | -0.841 | 0.608 | 0.076 | -0.427 |
| 10 | -0.439 | 0.244 | -1.92 | 0.659 |
| 11 | -1.0 | 0.409 | -0.117 | 0.213 |