Model info
| Transcription factor | Mxi1 | ||||||||
| Model | MXI1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vCACRYGKvnSbbbv | ||||||||
| Best auROC (human) | 0.878 | ||||||||
| Best auROC (mouse) | 0.973 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | Mad-like factors {1.2.6.7} | ||||||||
| MGI | MGI:97245 | ||||||||
| EntrezGene | GeneID:17859 (SSTAR profile) | ||||||||
| UniProt ID | MXI1_MOUSE | ||||||||
| UniProt AC | P50540 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Mxi1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 114.556 | 151.216 | 196.961 | 37.267 |
| 02 | 2.106 | 484.014 | 12.906 | 0.974 |
| 03 | 482.363 | 0.83 | 14.938 | 1.869 |
| 04 | 11.008 | 445.373 | 33.04 | 10.579 |
| 05 | 86.489 | 32.88 | 375.913 | 4.717 |
| 06 | 33.331 | 47.199 | 21.118 | 398.353 |
| 07 | 3.901 | 0.0 | 492.96 | 3.139 |
| 08 | 30.534 | 85.959 | 297.315 | 86.192 |
| 09 | 59.518 | 195.92 | 185.588 | 58.974 |
| 10 | 99.152 | 119.94 | 142.436 | 138.472 |
| 11 | 16.756 | 116.062 | 282.827 | 84.355 |
| 12 | 59.325 | 195.978 | 160.043 | 84.653 |
| 13 | 69.553 | 152.597 | 181.485 | 96.364 |
| 14 | 81.704 | 108.74 | 225.807 | 83.748 |
| 15 | 89.487 | 153.554 | 206.688 | 50.271 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.086 | 0.188 | 0.45 | -1.182 |
| 02 | -3.543 | 1.345 | -2.169 | -3.913 |
| 03 | 1.341 | -3.972 | -2.038 | -3.61 |
| 04 | -2.31 | 1.262 | -1.297 | -2.345 |
| 05 | -0.363 | -1.302 | 1.093 | -3.005 |
| 06 | -1.289 | -0.954 | -1.72 | 1.151 |
| 07 | -3.144 | -4.4 | 1.363 | -3.295 |
| 08 | -1.372 | -0.369 | 0.859 | -0.366 |
| 09 | -0.729 | 0.445 | 0.391 | -0.738 |
| 10 | -0.228 | -0.041 | 0.129 | 0.101 |
| 11 | -1.933 | -0.073 | 0.81 | -0.387 |
| 12 | -0.732 | 0.445 | 0.244 | -0.384 |
| 13 | -0.576 | 0.197 | 0.369 | -0.257 |
| 14 | -0.419 | -0.138 | 0.586 | -0.394 |
| 15 | -0.329 | 0.203 | 0.498 | -0.893 |