Model info
| Transcription factor | Mxi1 | ||||||||
| Model | MXI1_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 8 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | hCRCGTGS | ||||||||
| Best auROC (human) | 0.856 | ||||||||
| Best auROC (mouse) | 0.973 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 510 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | Mad-like factors {1.2.6.7} | ||||||||
| MGI | MGI:97245 | ||||||||
| EntrezGene | GeneID:17859 (SSTAR profile) | ||||||||
| UniProt ID | MXI1_MOUSE | ||||||||
| UniProt AC | P50540 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Mxi1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 150.0 | 225.0 | 50.0 | 75.0 |
| 02 | 35.0 | 439.0 | 25.0 | 1.0 |
| 03 | 377.0 | 6.0 | 98.0 | 19.0 |
| 04 | 13.0 | 468.0 | 19.0 | 0.0 |
| 05 | 126.0 | 2.0 | 370.0 | 2.0 |
| 06 | 12.0 | 0.0 | 3.0 | 485.0 |
| 07 | 0.0 | 3.0 | 494.0 | 3.0 |
| 08 | 7.0 | 210.0 | 238.0 | 45.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.18 | 0.582 | -0.898 | -0.503 |
| 02 | -1.242 | 1.247 | -1.561 | -3.903 |
| 03 | 1.096 | -2.819 | -0.24 | -1.818 |
| 04 | -2.163 | 1.311 | -1.818 | -4.4 |
| 05 | 0.008 | -3.573 | 1.077 | -3.573 |
| 06 | -2.234 | -4.4 | -3.325 | 1.347 |
| 07 | -4.4 | -3.325 | 1.365 | -3.325 |
| 08 | -2.694 | 0.514 | 0.638 | -1.0 |