Model info
| Transcription factor | MYBL1 (GeneCards) | ||||||||
| Model | MYBA_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vbbGRCvGTTRvnvv | ||||||||
| Best auROC (human) | 0.533 | ||||||||
| Best auROC (mouse) | 0.897 | ||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Myb/SANT domain factors {3.5.1} | ||||||||
| TF subfamily | Myb-like factors {3.5.1.1} | ||||||||
| HGNC | HGNC:7547 | ||||||||
| EntrezGene | GeneID:4603 (SSTAR profile) | ||||||||
| UniProt ID | MYBA_HUMAN | ||||||||
| UniProt AC | P10243 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MYBL1 expression | ||||||||
| ReMap ChIP-seq dataset list | MYBL1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 176.0 | 99.0 | 166.0 | 59.0 |
| 02 | 48.0 | 94.0 | 293.0 | 65.0 |
| 03 | 75.0 | 126.0 | 79.0 | 220.0 |
| 04 | 67.0 | 17.0 | 396.0 | 20.0 |
| 05 | 81.0 | 8.0 | 383.0 | 28.0 |
| 06 | 6.0 | 485.0 | 7.0 | 2.0 |
| 07 | 216.0 | 137.0 | 142.0 | 5.0 |
| 08 | 0.0 | 2.0 | 495.0 | 3.0 |
| 09 | 0.0 | 6.0 | 2.0 | 492.0 |
| 10 | 1.0 | 1.0 | 2.0 | 496.0 |
| 11 | 168.0 | 16.0 | 269.0 | 47.0 |
| 12 | 92.0 | 159.0 | 229.0 | 20.0 |
| 13 | 186.0 | 112.0 | 127.0 | 75.0 |
| 14 | 104.0 | 91.0 | 261.0 | 44.0 |
| 15 | 169.0 | 107.0 | 165.0 | 59.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.339 | -0.23 | 0.281 | -0.737 |
| 02 | -0.938 | -0.281 | 0.845 | -0.643 |
| 03 | -0.503 | 0.008 | -0.452 | 0.56 |
| 04 | -0.613 | -1.92 | 1.145 | -1.77 |
| 05 | -0.427 | -2.584 | 1.111 | -1.454 |
| 06 | -2.819 | 1.347 | -2.694 | -3.573 |
| 07 | 0.542 | 0.091 | 0.126 | -2.961 |
| 08 | -4.4 | -3.573 | 1.367 | -3.325 |
| 09 | -4.4 | -2.819 | -3.573 | 1.361 |
| 10 | -3.903 | -3.903 | -3.573 | 1.369 |
| 11 | 0.293 | -1.975 | 0.76 | -0.958 |
| 12 | -0.302 | 0.238 | 0.6 | -1.77 |
| 13 | 0.393 | -0.108 | 0.016 | -0.503 |
| 14 | -0.181 | -0.313 | 0.73 | -1.022 |
| 15 | 0.298 | -0.153 | 0.275 | -0.737 |