Check the newest release v13
Model info
Transcription factorMYB
(GeneCards)
ModelMYB_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusnhKRCvGTTRn
Best auROC (human)0.826
Best auROC (mouse)0.928
Peak sets in benchmark (human)27
Peak sets in benchmark (mouse)9
Aligned words379
TF familyMyb/SANT domain factors {3.5.1}
TF subfamilyMyb-like factors {3.5.1.1}
HGNCHGNC:7545
EntrezGeneGeneID:4602
(SSTAR profile)
UniProt IDMYB_HUMAN
UniProt ACP10242
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.419285
0.0005 11.832975000000001
0.0001 14.303075
GTEx tissue expression atlas MYB expression
ReMap ChIP-seq dataset list MYB datasets
Motifs in JASPAR
MA0100.1 (Myb; Mus musculus)
MA0100.2 (Myb; Mus musculus)
MA0100.3 (MYB; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.016.017.034.020.017.03.041.028.035.015.064.07.017.013.031.0
0216.03.042.014.025.01.031.028.019.04.018.07.09.01.0118.042.0
0323.00.036.010.04.00.04.01.079.06.0100.024.013.03.054.021.0
047.0109.01.02.00.09.00.00.07.0171.00.016.00.056.00.00.0
056.04.02.02.0185.076.038.046.00.01.00.00.01.00.016.01.0
060.00.0192.00.00.00.081.00.00.00.056.00.00.00.049.00.0
070.00.00.00.00.00.00.00.09.022.044.0303.00.00.00.00.0
080.00.00.09.00.00.00.022.00.00.01.043.03.03.016.0281.0
091.00.02.00.03.00.00.00.05.00.011.01.0104.02.0187.062.0
1032.024.041.016.02.00.00.00.039.053.073.035.019.08.021.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.164-0.382-0.3230.359-0.164-0.323-1.9630.5450.1670.388-0.4450.987-1.18-0.323-0.5850.268
02-0.382-1.9630.569-0.5130.056-2.8620.2680.167-0.214-1.703-0.267-1.18-0.94-2.8621.5960.569
03-0.026-4.170.416-0.839-1.703-4.17-1.703-2.8621.196-1.3261.4310.016-0.585-1.9630.818-0.116
04-1.181.517-2.862-2.315-4.17-0.94-4.17-4.17-1.181.966-4.17-0.382-4.170.854-4.17-4.17
05-1.326-1.703-2.315-2.3152.0441.1580.4690.659-4.17-2.862-4.17-4.17-2.862-4.17-0.382-2.862
06-4.17-4.172.082-4.17-4.17-4.171.221-4.17-4.17-4.170.854-4.17-4.17-4.170.721-4.17
07-4.17-4.17-4.17-4.17-4.17-4.17-4.17-4.17-0.94-0.070.6152.537-4.17-4.17-4.17-4.17
08-4.17-4.17-4.17-0.94-4.17-4.17-4.17-0.07-4.17-4.17-2.8620.592-1.963-1.963-0.3822.462
09-2.862-4.17-2.315-4.17-1.963-4.17-4.17-4.17-1.497-4.17-0.747-2.8621.47-2.3152.0550.955
100.2990.0160.545-0.382-2.315-4.17-4.17-4.170.4950.7991.1180.388-0.214-1.053-0.116-0.445