We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMYB
(GeneCards)
ModelMYB_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusnhKRCvGTTRn
Best auROC (human)0.826
Best auROC (mouse)0.928
Peak sets in benchmark (human)27
Peak sets in benchmark (mouse)9
Aligned words379
TF familyMyb/SANT domain factors {3.5.1}
TF subfamilyMyb-like factors {3.5.1.1}
HGNCHGNC:7545
EntrezGeneGeneID:4602
(SSTAR profile)
UniProt IDMYB_HUMAN
UniProt ACP10242
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.419285
0.0005 11.832975000000001
0.0001 14.303075
GTEx tissue expression atlas MYB expression
ReMap ChIP-seq dataset list MYB datasets
Motifs in JASPAR
MA0100.1 (Myb; Mus musculus)
MA0100.2 (Myb; Mus musculus)
MA0100.3 (MYB; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.016.017.034.020.017.03.041.028.035.015.064.07.017.013.031.0
0216.03.042.014.025.01.031.028.019.04.018.07.09.01.0118.042.0
0323.00.036.010.04.00.04.01.079.06.0100.024.013.03.054.021.0
047.0109.01.02.00.09.00.00.07.0171.00.016.00.056.00.00.0
056.04.02.02.0185.076.038.046.00.01.00.00.01.00.016.01.0
060.00.0192.00.00.00.081.00.00.00.056.00.00.00.049.00.0
070.00.00.00.00.00.00.00.09.022.044.0303.00.00.00.00.0
080.00.00.09.00.00.00.022.00.00.01.043.03.03.016.0281.0
091.00.02.00.03.00.00.00.05.00.011.01.0104.02.0187.062.0
1032.024.041.016.02.00.00.00.039.053.073.035.019.08.021.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.164-0.382-0.3230.359-0.164-0.323-1.9630.5450.1670.388-0.4450.987-1.18-0.323-0.5850.268
02-0.382-1.9630.569-0.5130.056-2.8620.2680.167-0.214-1.703-0.267-1.18-0.94-2.8621.5960.569
03-0.026-4.170.416-0.839-1.703-4.17-1.703-2.8621.196-1.3261.4310.016-0.585-1.9630.818-0.116
04-1.181.517-2.862-2.315-4.17-0.94-4.17-4.17-1.181.966-4.17-0.382-4.170.854-4.17-4.17
05-1.326-1.703-2.315-2.3152.0441.1580.4690.659-4.17-2.862-4.17-4.17-2.862-4.17-0.382-2.862
06-4.17-4.172.082-4.17-4.17-4.171.221-4.17-4.17-4.170.854-4.17-4.17-4.170.721-4.17
07-4.17-4.17-4.17-4.17-4.17-4.17-4.17-4.17-0.94-0.070.6152.537-4.17-4.17-4.17-4.17
08-4.17-4.17-4.17-0.94-4.17-4.17-4.17-0.07-4.17-4.17-2.8620.592-1.963-1.963-0.3822.462
09-2.862-4.17-2.315-4.17-1.963-4.17-4.17-4.17-1.497-4.17-0.747-2.8621.47-2.3152.0550.955
100.2990.0160.545-0.382-2.315-4.17-4.17-4.170.4950.7991.1180.388-0.214-1.053-0.116-0.445