We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMYB
(GeneCards)
ModelMYB_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdvhRRCMGYTRv
Best auROC (human)0.829
Best auROC (mouse)0.919
Peak sets in benchmark (human)27
Peak sets in benchmark (mouse)9
Aligned words500
TF familyMyb/SANT domain factors {3.5.1}
TF subfamilyMyb-like factors {3.5.1.1}
HGNCHGNC:7545
EntrezGeneGeneID:4602
(SSTAR profile)
UniProt IDMYB_HUMAN
UniProt ACP10242
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.093764999999999
0.0005 5.983785
0.0001 7.544090000000001
GTEx tissue expression atlas MYB expression
ReMap ChIP-seq dataset list MYB datasets
Motifs in JASPAR
PCM
ACGT
01147.054.0206.093.0
02120.0110.0206.064.0
03165.074.046.0215.0
04139.03.0315.043.0
05189.02.0254.055.0
066.0489.04.01.0
07304.095.043.058.0
080.02.0497.01.0
0931.062.021.0386.0
100.00.03.0497.0
11144.03.0287.066.0
12140.092.0203.065.0
PWM
ACGT
010.16-0.8230.495-0.291
02-0.04-0.1260.495-0.658
030.275-0.516-0.9790.537
040.105-3.3250.917-1.044
050.409-3.5730.703-0.805
06-2.8191.355-3.126-3.903
070.881-0.271-1.044-0.754
08-4.4-3.5731.371-3.903
09-1.358-0.689-1.7251.119
10-4.4-4.4-3.3251.371
110.14-3.3250.824-0.628
120.112-0.3020.48-0.643