Model info
| Transcription factor | MYB (GeneCards) | ||||||||
| Model | MYB_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvhRRCMGYTRv | ||||||||
| Best auROC (human) | 0.829 | ||||||||
| Best auROC (mouse) | 0.919 | ||||||||
| Peak sets in benchmark (human) | 27 | ||||||||
| Peak sets in benchmark (mouse) | 9 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Myb/SANT domain factors {3.5.1} | ||||||||
| TF subfamily | Myb-like factors {3.5.1.1} | ||||||||
| HGNC | HGNC:7545 | ||||||||
| EntrezGene | GeneID:4602 (SSTAR profile) | ||||||||
| UniProt ID | MYB_HUMAN | ||||||||
| UniProt AC | P10242 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MYB expression | ||||||||
| ReMap ChIP-seq dataset list | MYB datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 147.0 | 54.0 | 206.0 | 93.0 |
| 02 | 120.0 | 110.0 | 206.0 | 64.0 |
| 03 | 165.0 | 74.0 | 46.0 | 215.0 |
| 04 | 139.0 | 3.0 | 315.0 | 43.0 |
| 05 | 189.0 | 2.0 | 254.0 | 55.0 |
| 06 | 6.0 | 489.0 | 4.0 | 1.0 |
| 07 | 304.0 | 95.0 | 43.0 | 58.0 |
| 08 | 0.0 | 2.0 | 497.0 | 1.0 |
| 09 | 31.0 | 62.0 | 21.0 | 386.0 |
| 10 | 0.0 | 0.0 | 3.0 | 497.0 |
| 11 | 144.0 | 3.0 | 287.0 | 66.0 |
| 12 | 140.0 | 92.0 | 203.0 | 65.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.16 | -0.823 | 0.495 | -0.291 |
| 02 | -0.04 | -0.126 | 0.495 | -0.658 |
| 03 | 0.275 | -0.516 | -0.979 | 0.537 |
| 04 | 0.105 | -3.325 | 0.917 | -1.044 |
| 05 | 0.409 | -3.573 | 0.703 | -0.805 |
| 06 | -2.819 | 1.355 | -3.126 | -3.903 |
| 07 | 0.881 | -0.271 | -1.044 | -0.754 |
| 08 | -4.4 | -3.573 | 1.371 | -3.903 |
| 09 | -1.358 | -0.689 | -1.725 | 1.119 |
| 10 | -4.4 | -4.4 | -3.325 | 1.371 |
| 11 | 0.14 | -3.325 | 0.824 | -0.628 |
| 12 | 0.112 | -0.302 | 0.48 | -0.643 |