Model info
| Transcription factor | Myb | ||||||||
| Model | MYB_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvdKRCvGTTRv | ||||||||
| Best auROC (human) | 0.83 | ||||||||
| Best auROC (mouse) | 0.934 | ||||||||
| Peak sets in benchmark (human) | 27 | ||||||||
| Peak sets in benchmark (mouse) | 9 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Myb/SANT domain factors {3.5.1} | ||||||||
| TF subfamily | Myb-like factors {3.5.1.1} | ||||||||
| MGI | MGI:97249 | ||||||||
| EntrezGene | GeneID:17863 (SSTAR profile) | ||||||||
| UniProt ID | MYB_MOUSE | ||||||||
| UniProt AC | P06876 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Myb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 169.0 | 70.0 | 186.0 | 75.0 |
| 02 | 120.0 | 80.0 | 249.0 | 51.0 |
| 03 | 164.0 | 71.0 | 77.0 | 188.0 |
| 04 | 104.0 | 8.0 | 283.0 | 105.0 |
| 05 | 165.0 | 7.0 | 242.0 | 86.0 |
| 06 | 4.0 | 487.0 | 7.0 | 2.0 |
| 07 | 269.0 | 113.0 | 63.0 | 55.0 |
| 08 | 0.0 | 1.0 | 497.0 | 2.0 |
| 09 | 21.0 | 31.0 | 39.0 | 409.0 |
| 10 | 2.0 | 1.0 | 11.0 | 486.0 |
| 11 | 150.0 | 5.0 | 273.0 | 72.0 |
| 12 | 108.0 | 89.0 | 223.0 | 80.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.298 | -0.57 | 0.393 | -0.503 |
| 02 | -0.04 | -0.439 | 0.683 | -0.879 |
| 03 | 0.269 | -0.556 | -0.477 | 0.404 |
| 04 | -0.181 | -2.584 | 0.81 | -0.172 |
| 05 | 0.275 | -2.694 | 0.655 | -0.368 |
| 06 | -3.126 | 1.351 | -2.694 | -3.573 |
| 07 | 0.76 | -0.1 | -0.673 | -0.805 |
| 08 | -4.4 | -3.903 | 1.371 | -3.573 |
| 09 | -1.725 | -1.358 | -1.138 | 1.177 |
| 10 | -3.573 | -3.903 | -2.311 | 1.349 |
| 11 | 0.18 | -2.961 | 0.774 | -0.543 |
| 12 | -0.144 | -0.335 | 0.573 | -0.439 |