We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMYC
(GeneCards)
ModelMYC_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusvMCACGTGShb
Best auROC (human)0.947
Best auROC (mouse)0.948
Peak sets in benchmark (human)265
Peak sets in benchmark (mouse)126
Aligned words501
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyMyc / Max factors {1.2.6.5}
HGNCHGNC:7553
EntrezGeneGeneID:4609
(SSTAR profile)
UniProt IDMYC_HUMAN
UniProt ACP01106
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.48981
0.0005 4.437365
0.0001 6.4146149999999995
GTEx tissue expression atlas MYC expression
ReMap ChIP-seq dataset list MYC datasets
Motifs in JASPAR
MA0059.1 (MAX::MYC; Homo sapiens)
MA0147.1 (Myc; Mus musculus)
MA0147.2 (Myc; Mus musculus)
MA0147.3 (MYC; Homo sapiens)
PCM
ACGT
01110.0105.0215.070.0
0284.0375.026.015.0
0310.0485.02.03.0
04436.03.043.018.0
051.0344.02.0153.0
0610.011.0478.01.0
077.019.00.0474.0
082.04.0488.06.0
0925.0287.0109.079.0
1098.099.082.0221.0
1134.0191.0101.0174.0
PWM
ACGT
01-0.126-0.1720.537-0.57
02-0.3921.09-1.525-2.034
03-2.3941.347-3.573-3.325
041.241-3.325-1.044-1.868
05-3.9031.004-3.5730.2
06-2.394-2.3111.332-3.903
07-2.694-1.818-4.41.324
08-3.573-3.1261.353-2.819
09-1.5610.824-0.135-0.452
10-0.24-0.23-0.4150.565
11-1.270.42-0.210.327