Model info
| Transcription factor | Myc | ||||||||
| Model | MYC_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvMCWCGTGSbS | ||||||||
| Best auROC (human) | 0.917 | ||||||||
| Best auROC (mouse) | 0.957 | ||||||||
| Peak sets in benchmark (human) | 265 | ||||||||
| Peak sets in benchmark (mouse) | 126 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | Myc / Max factors {1.2.6.5} | ||||||||
| MGI | MGI:97250 | ||||||||
| EntrezGene | GeneID:17869 (SSTAR profile) | ||||||||
| UniProt ID | MYC_MOUSE | ||||||||
| UniProt AC | P01108 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Myc expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 123.0 | 205.0 | 101.0 | 71.0 |
| 02 | 85.0 | 98.0 | 247.0 | 70.0 |
| 03 | 60.0 | 389.0 | 43.0 | 8.0 |
| 04 | 5.0 | 492.0 | 0.0 | 3.0 |
| 05 | 352.0 | 4.0 | 66.0 | 78.0 |
| 06 | 4.0 | 448.0 | 6.0 | 42.0 |
| 07 | 50.0 | 41.0 | 401.0 | 8.0 |
| 08 | 6.0 | 100.0 | 1.0 | 393.0 |
| 09 | 2.0 | 2.0 | 480.0 | 16.0 |
| 10 | 21.0 | 272.0 | 139.0 | 68.0 |
| 11 | 45.0 | 114.0 | 200.0 | 141.0 |
| 12 | 47.0 | 348.0 | 62.0 | 43.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.016 | 0.49 | -0.21 | -0.556 |
| 02 | -0.38 | -0.24 | 0.675 | -0.57 |
| 03 | -0.721 | 1.127 | -1.044 | -2.584 |
| 04 | -2.961 | 1.361 | -4.4 | -3.325 |
| 05 | 1.027 | -3.126 | -0.628 | -0.464 |
| 06 | -3.126 | 1.268 | -2.819 | -1.067 |
| 07 | -0.898 | -1.09 | 1.157 | -2.584 |
| 08 | -2.819 | -0.22 | -3.903 | 1.137 |
| 09 | -3.573 | -3.573 | 1.336 | -1.975 |
| 10 | -1.725 | 0.771 | 0.105 | -0.599 |
| 11 | -1.0 | -0.091 | 0.465 | 0.119 |
| 12 | -0.958 | 1.016 | -0.689 | -1.044 |