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Model info
Transcription factorMyf5
ModelMYF5_MOUSE.H11DI.0.D
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
D
Motif rank
0
ConsensusnvnvddRACAGSTGn
Best auROC (human)
Best auROC (mouse)0.798
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words448
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyMyogenic transcription factors {1.2.2.1}
MGIMGI:97252
EntrezGeneGeneID:17877
(SSTAR profile)
UniProt IDMYF5_MOUSE
UniProt ACP24699
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.85331
0.0005 11.771260000000002
0.0001 15.79127
GTEx tissue expression atlas Myf5 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0149.035.037.014.055.032.03.010.025.031.039.010.013.043.039.07.0
0238.057.030.017.056.033.04.048.032.027.030.029.03.07.021.010.0
0348.033.034.014.060.023.06.035.030.030.016.09.036.025.039.04.0
0443.017.088.026.057.08.015.031.037.010.031.017.010.05.040.07.0
0527.018.072.030.013.011.03.013.061.020.053.040.010.010.047.014.0
0655.07.049.00.051.05.03.00.093.012.068.02.042.06.049.00.0
07186.07.047.01.027.02.00.01.0142.00.024.03.01.01.00.00.0
0839.0297.015.05.04.05.00.01.04.060.03.04.00.02.02.01.0
0946.00.01.00.0360.01.00.03.014.00.04.02.010.00.01.00.0
1027.01.0400.02.00.00.00.01.00.00.06.00.00.00.05.00.0
111.023.03.00.00.01.00.00.012.0292.0104.03.00.02.01.00.0
120.00.00.013.03.02.00.0313.03.00.00.0105.00.00.00.03.0
130.00.04.02.00.00.01.01.00.00.00.00.07.014.0407.06.0
141.01.04.01.06.04.00.04.082.0129.0113.088.02.01.03.03.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.5670.2340.289-0.6670.6820.145-2.114-0.992-0.0980.1140.341-0.992-0.7390.4380.341-1.334
020.3150.7170.081-0.4770.70.176-1.8550.5470.145-0.0230.0810.048-2.114-1.334-0.27-0.992
030.5470.1760.205-0.6670.768-0.18-1.4790.2340.0810.081-0.536-1.0940.262-0.0980.341-1.855
040.438-0.4771.149-0.060.717-1.206-0.5990.1140.289-0.9920.114-0.477-0.992-1.650.366-1.334
05-0.023-0.4210.950.081-0.739-0.9-2.114-0.7390.785-0.3180.6450.366-0.992-0.9920.526-0.667
060.682-1.3340.567-4.2980.607-1.65-2.114-4.2981.204-0.8160.893-2.4650.414-1.4790.567-4.298
071.895-1.3340.526-3.01-0.023-2.465-4.298-3.011.626-4.298-0.139-2.114-3.01-3.01-4.298-4.298
080.3412.363-0.599-1.65-1.855-1.65-4.298-3.01-1.8550.768-2.114-1.855-4.298-2.465-2.465-3.01
090.504-4.298-3.01-4.2982.555-3.01-4.298-2.114-0.667-4.298-1.855-2.465-0.992-4.298-3.01-4.298
10-0.023-3.012.66-2.465-4.298-4.298-4.298-3.01-4.298-4.298-1.479-4.298-4.298-4.298-1.65-4.298
11-3.01-0.18-2.114-4.298-4.298-3.01-4.298-4.298-0.8162.3461.316-2.114-4.298-2.465-3.01-4.298
12-4.298-4.298-4.298-0.739-2.114-2.465-4.2982.415-2.114-4.298-4.2981.325-4.298-4.298-4.298-2.114
13-4.298-4.298-1.855-2.465-4.298-4.298-3.01-3.01-4.298-4.298-4.298-4.298-1.334-0.6672.677-1.479
14-3.01-3.01-1.855-3.01-1.479-1.855-4.298-1.8551.0791.531.3981.149-2.465-3.01-2.114-2.114