Transcription factor | Myf6 | ||||||||
Model | MYF6_MOUSE.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 7 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | CAGCTGC | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 9 | ||||||||
TF family | MyoD / ASC-related factors {1.2.2} | ||||||||
TF subfamily | Myogenic transcription factors {1.2.2.1} | ||||||||
MGI | MGI:97253 | ||||||||
EntrezGene | GeneID:17878 (SSTAR profile) | ||||||||
UniProt ID | MYF6_MOUSE | ||||||||
UniProt AC | P15375 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Myf6 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 0.0 | 7.0 | 0.0 | 0.0 |
02 | 7.0 | 0.0 | 0.0 | 0.0 |
03 | 0.0 | 3.048 | 3.952 | 0.0 |
04 | 0.0 | 7.0 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 7.0 |
06 | 0.0 | 0.0 | 7.0 | 0.0 |
07 | 0.226 | 5.306 | 0.226 | 1.242 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.525 | 1.208 | -1.525 | -1.525 |
02 | 1.208 | -1.525 | -1.525 | -1.525 |
03 | -1.525 | 0.458 | 0.685 | -1.525 |
04 | -1.525 | 1.208 | -1.525 | -1.525 |
05 | -1.525 | -1.525 | -1.525 | 1.208 |
06 | -1.525 | -1.525 | 1.208 | -1.525 |
07 | -1.144 | 0.952 | -1.144 | -0.258 |