Model info
| Transcription factor | MYNN (GeneCards) | ||||||||
| Model | MYNN_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRRCTYTTAWKbYRdhR | ||||||||
| Best auROC (human) | 0.796 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 366 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:14955 | ||||||||
| EntrezGene | GeneID:55892 (SSTAR profile) | ||||||||
| UniProt ID | MYNN_HUMAN | ||||||||
| UniProt AC | Q9NPC7 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | MYNN expression | ||||||||
| ReMap ChIP-seq dataset list | MYNN datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 118.0 | 17.0 | 165.0 | 66.0 |
| 02 | 38.0 | 20.0 | 284.0 | 24.0 |
| 03 | 205.0 | 13.0 | 128.0 | 20.0 |
| 04 | 9.0 | 353.0 | 4.0 | 0.0 |
| 05 | 0.0 | 6.0 | 5.0 | 355.0 |
| 06 | 11.0 | 126.0 | 20.0 | 209.0 |
| 07 | 11.0 | 34.0 | 15.0 | 306.0 |
| 08 | 15.0 | 4.0 | 4.0 | 343.0 |
| 09 | 325.0 | 11.0 | 13.0 | 17.0 |
| 10 | 89.0 | 34.0 | 9.0 | 234.0 |
| 11 | 18.0 | 35.0 | 49.0 | 264.0 |
| 12 | 38.0 | 60.0 | 59.0 | 209.0 |
| 13 | 38.0 | 46.0 | 22.0 | 260.0 |
| 14 | 59.0 | 26.0 | 239.0 | 42.0 |
| 15 | 193.0 | 29.0 | 83.0 | 61.0 |
| 16 | 205.0 | 83.0 | 30.0 | 48.0 |
| 17 | 213.0 | 34.0 | 86.0 | 33.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.251 | -1.616 | 0.583 | -0.321 |
| 02 | -0.857 | -1.465 | 1.122 | -1.295 |
| 03 | 0.798 | -1.86 | 0.331 | -1.465 |
| 04 | -2.183 | 1.338 | -2.832 | -4.143 |
| 05 | -4.143 | -2.521 | -2.664 | 1.344 |
| 06 | -2.009 | 0.316 | -1.465 | 0.817 |
| 07 | -2.009 | -0.963 | -1.73 | 1.196 |
| 08 | -1.73 | -2.832 | -2.832 | 1.31 |
| 09 | 1.256 | -2.009 | -1.86 | -1.616 |
| 10 | -0.027 | -0.963 | -2.183 | 0.929 |
| 11 | -1.563 | -0.936 | -0.611 | 1.049 |
| 12 | -0.857 | -0.414 | -0.43 | 0.817 |
| 13 | -0.857 | -0.672 | -1.376 | 1.034 |
| 14 | -0.43 | -1.219 | 0.95 | -0.76 |
| 15 | 0.738 | -1.115 | -0.096 | -0.398 |
| 16 | 0.798 | -0.096 | -1.083 | -0.631 |
| 17 | 0.836 | -0.963 | -0.061 | -0.992 |