We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorMYOG
(GeneCards)
ModelMYOG_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusbhvCAGCTGYYhb
Best auROC (human)
Best auROC (mouse)0.994
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)20
Aligned words500
TF familyMyoD / ASC-related factors {1.2.2}
TF subfamilyMyogenic transcription factors {1.2.2.1}
HGNCHGNC:7612
EntrezGeneGeneID:4656
(SSTAR profile)
UniProt IDMYOG_HUMAN
UniProt ACP15173
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.4619599999999995
0.0005 4.59196
0.0001 7.1808700000000005
GTEx tissue expression atlas MYOG expression
ReMap ChIP-seq dataset list MYOG datasets
Motifs in JASPAR
MA0500.1 (Myog; Mus musculus)
PCM
ACGT
0136.0247.0103.0114.0
02152.0178.049.0121.0
03108.0132.0223.037.0
042.0496.02.00.0
05492.00.03.05.0
062.057.0438.03.0
075.0485.04.06.0
081.00.02.0497.0
091.00.0499.00.0
102.0199.023.0276.0
112.0287.024.0187.0
1294.0215.080.0111.0
1357.0190.097.0156.0
PWM
ACGT
01-1.2150.675-0.191-0.091
020.1930.35-0.918-0.032
03-0.1440.0540.573-1.189
04-3.5731.369-3.573-4.4
051.361-4.4-3.325-2.961
06-3.573-0.7711.245-3.325
07-2.9611.347-3.126-2.819
08-3.903-4.4-3.5731.371
09-3.903-4.41.375-4.4
10-3.5730.46-1.640.785
11-3.5730.824-1.60.399
12-0.2810.537-0.439-0.117
13-0.7710.415-0.250.219