We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFE2L2
(GeneCards)
ModelNF2L2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusWhhTGCTGAGTCAY
Best auROC (human)0.89
Best auROC (mouse)0.983
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)26
Aligned words500
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
HGNCHGNC:7782
EntrezGeneGeneID:4780
(SSTAR profile)
UniProt IDNF2L2_HUMAN
UniProt ACQ16236
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.44076
0.0005 3.7462599999999995
0.0001 6.49641
GTEx tissue expression atlas NFE2L2 expression
ReMap ChIP-seq dataset list NFE2L2 datasets
Motifs in JASPAR
MA0150.1 (NFE2L2; Homo sapiens)
MA0150.2 (Nfe2l2; Mus musculus)
PCM
ACGT
01259.024.059.0158.0
02237.051.043.0169.0
0388.0178.071.0163.0
0438.023.010.0429.0
055.010.0477.08.0
0610.0483.03.04.0
0727.025.02.0446.0
0816.019.0437.028.0
09454.06.06.034.0
1012.071.0408.09.0
111.04.02.0493.0
124.0496.00.00.0
13499.01.00.00.0
143.0130.024.0343.0
PWM
ACGT
010.722-1.6-0.7370.232
020.634-0.879-1.0440.298
03-0.3460.35-0.5560.263
04-1.163-1.64-2.3941.224
05-2.961-2.3941.33-2.584
06-2.3941.343-3.325-3.126
07-1.489-1.561-3.5731.263
08-1.975-1.8181.243-1.454
091.281-2.819-2.819-1.27
10-2.234-0.5561.174-2.484
11-3.903-3.126-3.5731.363
12-3.1261.369-4.4-4.4
131.375-3.903-4.4-4.4
14-3.3250.039-1.61.002