Transcription factor | Nfe2l2 | ||||||||
Model | NF2L2_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | RTGASWhRGCWddh | ||||||||
Best auROC (human) | 0.894 | ||||||||
Best auROC (mouse) | 0.986 | ||||||||
Peak sets in benchmark (human) | 5 | ||||||||
Peak sets in benchmark (mouse) | 26 | ||||||||
Aligned words | 478 | ||||||||
TF family | Jun-related factors {1.1.1} | ||||||||
TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
MGI | MGI:108420 | ||||||||
EntrezGene | GeneID:18024 (SSTAR profile) | ||||||||
UniProt ID | NF2L2_MOUSE | ||||||||
UniProt AC | Q60795 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Nfe2l2 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 267.0 | 46.0 | 148.0 | 17.0 |
02 | 25.0 | 4.0 | 8.0 | 441.0 |
03 | 24.0 | 15.0 | 413.0 | 26.0 |
04 | 432.0 | 14.0 | 16.0 | 16.0 |
05 | 38.0 | 327.0 | 79.0 | 34.0 |
06 | 81.0 | 30.0 | 18.0 | 349.0 |
07 | 70.0 | 281.0 | 63.0 | 64.0 |
08 | 335.0 | 8.0 | 75.0 | 60.0 |
09 | 38.0 | 31.0 | 395.0 | 14.0 |
10 | 25.0 | 402.0 | 34.0 | 17.0 |
11 | 376.0 | 35.0 | 20.0 | 47.0 |
12 | 161.0 | 69.0 | 159.0 | 89.0 |
13 | 160.0 | 54.0 | 84.0 | 180.0 |
14 | 172.0 | 73.0 | 53.0 | 180.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.797 | -0.935 | 0.211 | -1.876 |
02 | -1.517 | -3.084 | -2.54 | 1.296 |
03 | -1.556 | -1.99 | 1.231 | -1.48 |
04 | 1.276 | -2.053 | -1.932 | -1.932 |
05 | -1.119 | 0.999 | -0.407 | -1.225 |
06 | -0.383 | -1.345 | -1.824 | 1.063 |
07 | -0.526 | 0.848 | -0.629 | -0.613 |
08 | 1.023 | -2.54 | -0.458 | -0.676 |
09 | -1.119 | -1.314 | 1.187 | -2.053 |
10 | -1.517 | 1.204 | -1.225 | -1.876 |
11 | 1.138 | -1.198 | -1.726 | -0.914 |
12 | 0.295 | -0.54 | 0.282 | -0.29 |
13 | 0.289 | -0.779 | -0.347 | 0.405 |
14 | 0.36 | -0.485 | -0.797 | 0.405 |