We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFATC1
(GeneCards)
ModelNFAC1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusdWGGAARndnTKWvYMWn
Best auROC (human)0.812
Best auROC (mouse)0.954
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc1 {6.1.3.0.1}
HGNCHGNC:7775
EntrezGeneGeneID:4772
(SSTAR profile)
UniProt IDNFAC1_HUMAN
UniProt ACO95644
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.776610000000002
0.0005 11.823260000000001
0.0001 15.99391
GTEx tissue expression atlas NFATC1 expression
ReMap ChIP-seq dataset list NFATC1 datasets
Motifs in JASPAR
MA0624.1 (NFATC1; Meleagris gallopavo)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.08.08.0176.018.04.00.059.021.03.010.065.030.08.017.042.0
021.01.097.01.02.00.021.00.00.01.033.01.02.01.0338.01.0
030.00.05.00.00.00.03.00.02.02.0485.00.00.00.03.00.0
042.00.00.00.00.02.00.00.0470.07.017.02.00.00.00.00.0
05444.00.021.07.09.00.00.00.014.00.02.01.01.00.00.01.0
06378.029.034.027.00.00.00.00.016.02.04.01.07.01.00.01.0
07229.070.076.026.015.011.02.04.022.08.08.00.010.06.09.04.0
0890.022.036.0128.040.06.04.045.051.05.08.031.09.03.010.012.0
0975.039.055.021.016.07.06.07.024.013.09.012.062.056.068.030.0
1014.05.07.0151.07.07.02.099.015.011.04.0108.06.013.05.046.0
117.06.021.08.010.010.02.014.02.09.05.02.022.013.0295.074.0
1221.04.011.05.019.07.02.010.0266.012.019.026.051.017.012.018.0
1350.0118.0162.027.010.014.011.05.06.019.013.06.05.013.037.04.0
1414.015.08.034.027.015.07.0115.019.025.019.0160.01.08.012.021.0
1521.030.07.03.022.021.02.018.011.018.09.08.033.0241.038.018.0
1652.011.016.08.0267.020.03.020.019.04.017.016.010.014.014.09.0
1741.0105.0101.0101.021.013.02.013.06.011.017.016.06.013.019.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.008-1.328-1.3281.718-0.543-1.975-4.40.63-0.392-2.234-1.1140.726-0.04-1.328-0.5990.293
02-3.126-3.1261.124-3.126-2.584-4.4-0.392-4.4-4.4-3.1260.054-3.126-2.584-3.1262.37-3.126
03-4.4-4.4-1.77-4.4-4.4-4.4-2.234-4.4-2.584-2.5842.731-4.4-4.4-4.4-2.234-4.4
04-2.584-4.4-4.4-4.4-4.4-2.584-4.4-4.42.699-1.454-0.599-2.584-4.4-4.4-4.4-4.4
052.642-4.4-0.392-1.454-1.215-4.4-4.4-4.4-0.788-4.4-2.584-3.126-3.126-4.4-4.4-3.126
062.482-0.0740.083-0.144-4.4-4.4-4.4-4.4-0.658-2.584-1.975-3.126-1.454-3.126-4.4-3.126
071.9810.80.881-0.181-0.721-1.022-2.584-1.975-0.346-1.328-1.328-4.4-1.114-1.6-1.215-1.975
081.05-0.3460.141.4010.244-1.6-1.9750.3610.485-1.77-1.328-0.008-1.215-2.234-1.114-0.938
090.8680.2190.56-0.392-0.658-1.454-1.6-1.454-0.26-0.86-1.215-0.9380.6790.5780.771-0.04
10-0.788-1.77-1.4541.565-1.454-1.454-2.5841.145-0.721-1.022-1.9751.231-1.6-0.86-1.770.383
11-1.454-1.6-0.392-1.328-1.114-1.114-2.584-0.788-2.584-1.215-1.77-2.584-0.346-0.862.2340.855
12-0.392-1.975-1.022-1.77-0.49-1.454-2.584-1.1142.131-0.938-0.49-0.1810.485-0.599-0.938-0.543
130.4651.321.636-0.144-1.114-0.788-1.022-1.77-1.6-0.49-0.86-1.6-1.77-0.860.167-1.975
14-0.788-0.721-1.3280.083-0.144-0.721-1.4541.294-0.49-0.22-0.491.623-3.126-1.328-0.938-0.392
15-0.392-0.04-1.454-2.234-0.346-0.392-2.584-0.543-1.022-0.543-1.215-1.3280.0542.0320.193-0.543
160.504-1.022-0.658-1.3282.134-0.439-2.234-0.439-0.49-1.975-0.599-0.658-1.114-0.788-0.788-1.215
170.2691.2031.1651.165-0.392-0.86-2.584-0.86-1.6-1.022-0.599-0.658-1.6-0.86-0.49-0.721