We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNfatc1
ModelNFAC1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusvWGGAARvdnWKWvWSRn
Best auROC (human)0.726
Best auROC (mouse)0.963
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words508
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc1 {6.1.3.0.1}
MGIMGI:102469
EntrezGene
UniProt IDNFAC1_MOUSE
UniProt ACO88942
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.516460000000002
0.0005 11.49691
0.0001 15.64591
GTEx tissue expression atlas Nfatc1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0136.021.024.0132.022.09.01.056.030.05.010.071.018.013.013.039.0
024.00.0100.02.08.00.040.00.02.01.044.01.02.01.0292.03.0
030.00.016.00.00.00.02.00.04.02.0470.00.00.01.05.00.0
042.00.02.00.02.01.00.00.0453.09.030.01.00.00.00.00.0
05411.04.040.02.09.01.00.00.022.04.05.01.00.01.00.00.0
06329.035.046.032.08.01.00.01.033.04.08.00.02.00.00.01.0
07175.065.0101.031.026.04.04.06.030.05.018.01.010.06.08.010.0
08102.015.027.097.035.06.00.039.067.011.012.041.012.08.012.016.0
0976.051.072.017.013.09.07.011.021.05.017.08.053.048.058.034.0
107.04.013.0139.011.06.03.093.032.09.04.0109.05.03.014.048.0
117.06.036.06.05.07.06.04.03.06.015.010.08.07.0331.043.0
1215.02.06.00.017.02.02.05.0331.09.019.029.036.07.07.013.0
1349.0126.0205.019.08.03.06.03.02.012.013.07.05.07.032.03.0
1415.02.06.041.019.07.09.0113.033.022.016.0185.04.04.09.015.0
158.035.022.06.010.011.03.011.04.016.017.03.046.0254.031.023.0
1649.06.012.01.0281.013.07.015.035.06.014.018.08.012.018.05.0
1731.0136.0107.099.023.05.01.08.07.07.022.015.08.09.011.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.14-0.392-0.261.431-0.346-1.215-3.1260.578-0.04-1.77-1.1140.814-0.543-0.86-0.860.219
02-1.975-4.41.155-2.584-1.328-4.40.244-4.4-2.584-3.1260.339-3.126-2.584-3.1262.224-2.234
03-4.4-4.4-0.658-4.4-4.4-4.4-2.584-4.4-1.975-2.5842.699-4.4-4.4-3.126-1.77-4.4
04-2.584-4.4-2.584-4.4-2.584-3.126-4.4-4.42.662-1.215-0.04-3.126-4.4-4.4-4.4-4.4
052.565-1.9750.244-2.584-1.215-3.126-4.4-4.4-0.346-1.975-1.77-3.126-4.4-3.126-4.4-4.4
062.3430.1120.3830.023-1.328-3.126-4.4-3.1260.054-1.975-1.328-4.4-2.584-4.4-4.4-3.126
071.7130.7261.165-0.008-0.181-1.975-1.975-1.6-0.04-1.77-0.543-3.126-1.114-1.6-1.328-1.114
081.174-0.721-0.1441.1240.112-1.6-4.40.2190.756-1.022-0.9380.269-0.938-1.328-0.938-0.658
090.8810.4850.828-0.599-0.86-1.215-1.454-1.022-0.392-1.77-0.599-1.3280.5230.4250.6130.083
10-1.454-1.975-0.861.483-1.022-1.6-2.2341.0820.023-1.215-1.9751.241-1.77-2.234-0.7880.425
11-1.454-1.60.14-1.6-1.77-1.454-1.6-1.975-2.234-1.6-0.721-1.114-1.328-1.4542.3490.316
12-0.721-2.584-1.6-4.4-0.599-2.584-2.584-1.772.349-1.215-0.49-0.0740.14-1.454-1.454-0.86
130.4451.3851.871-0.49-1.328-2.234-1.6-2.234-2.584-0.938-0.86-1.454-1.77-1.4540.023-2.234
14-0.721-2.584-1.60.269-0.49-1.454-1.2151.2760.054-0.346-0.6581.768-1.975-1.975-1.215-0.721
15-1.3280.112-0.346-1.6-1.114-1.022-2.234-1.022-1.975-0.658-0.599-2.2340.3832.084-0.008-0.302
160.445-1.6-0.938-3.1262.185-0.86-1.454-0.7210.112-1.6-0.788-0.543-1.328-0.938-0.543-1.77
17-0.0081.4611.2221.145-0.302-1.77-3.126-1.328-1.454-1.454-0.346-0.721-1.328-1.215-1.022-1.022