We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFATC2
(GeneCards)
ModelNFAC2_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
B
Motif rank
0
ConsensusdGGAAAWhb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words87
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc2 (NFATp, NFAT1) {6.1.3.0.2}
HGNCHGNC:7776
EntrezGeneGeneID:4773
(SSTAR profile)
UniProt IDNFAC2_HUMAN
UniProt ACQ13469
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.88304
0.0005 6.9328
0.0001 8.503540000000001
GTEx tissue expression atlas NFATC2 expression
ReMap ChIP-seq dataset list NFATC2 datasets
Motifs in JASPAR
PCM
ACGT
0122.0354.84612.4946.595
020.00.085.9660.0
030.00.085.9660.0
0485.9660.00.00.0
0583.5960.02.370.0
0681.8381.4392.6890.0
0768.3994.9945.2487.325
0825.54911.4538.49140.473
0913.74220.21314.71237.299
PWM
ACGT
010.024-1.333-0.5080.747
02-3.011-3.0111.349-3.011
03-3.011-3.0111.349-3.011
041.349-3.011-3.011-3.011
051.321-3.011-1.87-3.011
061.3-2.181-1.782-3.011
071.123-1.309-1.268-0.985
080.165-0.587-0.8560.61
09-0.42-0.058-0.3570.53