We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNfatc2
ModelNFAC2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusnvvWGGAAAvdnhddn
Best auROC (human)
Best auROC (mouse)0.954
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words507
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc2 (NFATp, NFAT1) {6.1.3.0.2}
MGIMGI:102463
EntrezGeneGeneID:18019
(SSTAR profile)
UniProt IDNFAC2_MOUSE
UniProt ACQ60591
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.61656
0.0005 13.62481
0.0001 17.052460000000004
GTEx tissue expression atlas Nfatc2 expression
Motifs in JASPAR
MA0152.1 (NFATC2; Mus musculus/Rattus norvegicus/Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0176.018.027.014.073.026.03.019.067.016.047.021.021.026.020.026.0
02113.041.072.011.046.018.011.011.055.014.023.05.025.023.022.010.0
0335.08.023.0173.018.01.01.076.022.00.019.087.012.03.05.017.0
040.01.086.00.00.00.012.00.00.00.048.00.00.00.0353.00.0
050.00.00.00.00.00.01.00.00.00.0499.00.00.00.00.00.0
060.00.00.00.00.00.00.00.0497.00.01.02.00.00.00.00.0
07485.01.011.00.00.00.00.00.01.00.00.00.01.00.01.00.0
08397.031.036.023.01.00.00.00.07.03.02.00.00.00.00.00.0
09155.089.0112.049.026.02.03.03.023.05.08.02.08.04.06.05.0
10107.014.031.060.045.06.02.047.058.010.019.042.018.01.010.030.0
11108.036.056.028.015.08.03.05.021.011.013.017.050.051.041.037.0
1260.025.025.084.022.027.08.049.027.018.018.050.021.013.017.036.0
1355.017.045.013.043.014.07.019.034.09.016.09.021.018.0150.030.0
1483.010.046.014.033.07.04.014.0144.011.033.030.026.05.030.010.0
1561.082.0107.036.09.03.02.019.028.036.026.023.010.019.027.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.881-0.543-0.144-0.7880.841-0.181-2.234-0.490.756-0.6580.404-0.392-0.392-0.181-0.439-0.181
021.2760.2690.828-1.0220.383-0.543-1.022-1.0220.56-0.788-0.302-1.77-0.22-0.302-0.346-1.114
030.112-1.328-0.3021.701-0.543-3.126-3.1260.881-0.346-4.4-0.491.016-0.938-2.234-1.77-0.599
04-4.4-3.1261.004-4.4-4.4-4.4-0.938-4.4-4.4-4.40.425-4.4-4.4-4.42.413-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.42.759-4.4-4.4-4.4-4.4-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.755-4.4-3.126-2.584-4.4-4.4-4.4-4.4
072.731-3.126-1.022-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-3.126-4.4-3.126-4.4
082.531-0.0080.14-0.302-3.126-4.4-4.4-4.4-1.454-2.234-2.584-4.4-4.4-4.4-4.4-4.4
091.5921.0391.2680.445-0.181-2.584-2.234-2.234-0.302-1.77-1.328-2.584-1.328-1.975-1.6-1.77
101.222-0.788-0.0080.6460.361-1.6-2.5840.4040.613-1.114-0.490.293-0.543-3.126-1.114-0.04
111.2310.140.578-0.108-0.721-1.328-2.234-1.77-0.392-1.022-0.86-0.5990.4650.4850.2690.167
120.646-0.22-0.220.981-0.346-0.144-1.3280.445-0.144-0.543-0.5430.465-0.392-0.86-0.5990.14
130.56-0.5990.361-0.860.316-0.788-1.454-0.490.083-1.215-0.658-1.215-0.392-0.5431.559-0.04
140.969-1.1140.383-0.7880.054-1.454-1.975-0.7881.518-1.0220.054-0.04-0.181-1.77-0.04-1.114
150.6630.9571.2220.14-1.215-2.234-2.584-0.49-0.1080.14-0.181-0.302-1.114-0.49-0.144-0.938