Model info
| Transcription factor | Nfatc2 | ||||||||
| Model | NFAC2_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGGAAAWhb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.915 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 87 | ||||||||
| TF family | NFAT-related factors {6.1.3} | ||||||||
| TF subfamily | NFATc2 (NFATp, NFAT1) {6.1.3.0.2} | ||||||||
| MGI | MGI:102463 | ||||||||
| EntrezGene | GeneID:18019 (SSTAR profile) | ||||||||
| UniProt ID | NFAC2_MOUSE | ||||||||
| UniProt AC | Q60591 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Nfatc2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 22.035 | 4.846 | 12.49 | 46.595 |
| 02 | 0.0 | 0.0 | 85.966 | 0.0 |
| 03 | 0.0 | 0.0 | 85.966 | 0.0 |
| 04 | 85.966 | 0.0 | 0.0 | 0.0 |
| 05 | 83.596 | 0.0 | 2.37 | 0.0 |
| 06 | 81.838 | 1.439 | 2.689 | 0.0 |
| 07 | 68.399 | 4.994 | 5.248 | 7.325 |
| 08 | 25.549 | 11.453 | 8.491 | 40.473 |
| 09 | 13.742 | 20.213 | 14.712 | 37.299 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.024 | -1.333 | -0.508 | 0.747 |
| 02 | -3.011 | -3.011 | 1.349 | -3.011 |
| 03 | -3.011 | -3.011 | 1.349 | -3.011 |
| 04 | 1.349 | -3.011 | -3.011 | -3.011 |
| 05 | 1.321 | -3.011 | -1.87 | -3.011 |
| 06 | 1.3 | -2.181 | -1.782 | -3.011 |
| 07 | 1.123 | -1.309 | -1.268 | -0.985 |
| 08 | 0.165 | -0.587 | -0.856 | 0.61 |
| 09 | -0.42 | -0.058 | -0.357 | 0.53 |