Model info
| Transcription factor | Nfatc3 | ||||||||
| Model | NFAC3_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hGGAAAAhY | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 18 | ||||||||
| TF family | NFAT-related factors {6.1.3} | ||||||||
| TF subfamily | NFATc3 (NFATx, NFAT4) {6.1.3.0.3} | ||||||||
| MGI | MGI:103296 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | NFAC3_MOUSE | ||||||||
| UniProt AC | P97305 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Nfatc3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.5 | 2.5 | 0.5 | 12.833 |
| 02 | 0.0 | 0.0 | 18.333 | 0.0 |
| 03 | 0.0 | 0.0 | 18.333 | 0.0 |
| 04 | 17.111 | 0.0 | 1.222 | 0.0 |
| 05 | 16.333 | 0.0 | 2.0 | 0.0 |
| 06 | 18.333 | 0.0 | 0.0 | 0.0 |
| 07 | 14.222 | 3.111 | 1.0 | 0.0 |
| 08 | 6.0 | 7.222 | 1.222 | 3.889 |
| 09 | 2.111 | 5.778 | 0.889 | 9.556 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.498 | -0.498 | -1.465 | 0.937 |
| 02 | -1.988 | -1.988 | 1.278 | -1.988 |
| 03 | -1.988 | -1.988 | 1.278 | -1.988 |
| 04 | 1.212 | -1.988 | -1.002 | -1.988 |
| 05 | 1.167 | -1.988 | -0.666 | -1.988 |
| 06 | 1.278 | -1.988 | -1.988 | -1.988 |
| 07 | 1.035 | -0.325 | -1.123 | -1.988 |
| 08 | 0.236 | 0.403 | -1.002 | -0.14 |
| 09 | -0.626 | 0.203 | -1.19 | 0.661 |