We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFATC4
(GeneCards)
ModelNFAC4_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusdGGAAARhdW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words19
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc4 (NFAT3) {6.1.3.0.4}
HGNCHGNC:7778
EntrezGeneGeneID:4776
(SSTAR profile)
UniProt IDNFAC4_HUMAN
UniProt ACQ14934
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.935695
0.0005 6.71896
0.0001 7.93427
GTEx tissue expression atlas NFATC4 expression
ReMap ChIP-seq dataset list NFATC4 datasets
Motifs in JASPAR
PCM
ACGT
017.8932.7233.9334.483
020.00.018.040.99
030.00.019.030.0
0419.030.00.00.0
0519.030.00.00.0
0619.030.00.00.0
0711.992.973.080.99
083.964.952.098.03
093.082.974.078.91
105.940.04.079.02
PWM
ACGT
010.451-0.463-0.163-0.051
02-2.009-2.0091.229-1.158
03-2.009-2.0091.28-2.009
041.28-2.009-2.009-2.009
051.28-2.009-2.009-2.009
061.28-2.009-2.009-2.009
070.84-0.394-0.364-1.158
08-0.1570.034-0.6650.467
09-0.364-0.394-0.1340.563
100.195-2.009-0.1340.574