We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFAT5
(GeneCards)
ModelNFAT5_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
D
Motif rank
0
ConsensusvvdGGAARddn
Best auROC (human)0.706
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFAT5 (TonEBP) {6.1.3.0.5}
HGNCHGNC:7774
EntrezGeneGeneID:10725
(SSTAR profile)
UniProt IDNFAT5_HUMAN
UniProt ACO94916
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.2174499999999995
0.0005 6.93659
0.0001 7.84952
GTEx tissue expression atlas NFAT5 expression
ReMap ChIP-seq dataset list NFAT5 datasets
Motifs in JASPAR
MA0606.1 (NFAT5; Gallus gallus)
PCM
ACGT
01182.075.0177.066.0
02139.0104.0225.032.0
03216.022.0155.0107.0
048.06.0482.04.0
058.03.0487.02.0
06482.06.02.010.0
07479.05.016.00.0
08306.011.0175.08.0
09201.028.0184.087.0
10137.061.0181.0121.0
11121.077.0154.0148.0
PWM
ACGT
010.372-0.5030.344-0.628
020.105-0.1810.582-1.328
030.542-1.6810.213-0.153
04-2.584-2.8191.34-3.126
05-2.584-3.3251.351-3.573
061.34-2.819-3.573-2.394
071.334-2.961-1.975-4.4
080.888-2.3110.333-2.584
090.47-1.4540.383-0.357
100.091-0.7050.366-0.032
11-0.032-0.4770.2060.167