We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFE2
(GeneCards)
ModelNFE2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnvvvRTGACbSvSSvn
Best auROC (human)0.978
Best auROC (mouse)0.994
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)9
Aligned words369
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
HGNCHGNC:7780
EntrezGeneGeneID:4778
(SSTAR profile)
UniProt IDNFE2_HUMAN
UniProt ACQ16621
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.83141
0.0005 8.70366
0.0001 12.54001
GTEx tissue expression atlas NFE2 expression
ReMap ChIP-seq dataset list NFE2 datasets
Motifs in JASPAR
MA0501.1 (MAF::NFE2; Homo sapiens)
MA0841.1 (NFE2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0124.017.021.07.039.051.07.010.015.039.027.013.04.072.017.03.0
0210.026.040.06.0141.021.05.012.010.025.028.09.07.011.014.01.0
034.0135.018.011.026.035.07.015.017.029.032.09.02.07.014.05.0
0416.02.031.00.068.04.0134.00.035.03.033.00.011.03.025.01.0
050.02.00.0128.00.00.00.012.00.00.01.0222.00.00.00.01.0
060.00.00.00.01.00.01.00.00.00.01.00.00.00.0359.04.0
071.00.00.00.00.00.00.00.0348.05.08.00.04.00.00.00.0
086.0285.042.020.00.04.00.01.00.04.00.04.00.00.00.00.0
090.01.01.04.035.044.050.0164.02.01.02.037.04.06.011.04.0
105.026.03.07.07.020.012.013.09.029.014.012.019.0157.019.014.0
1119.05.015.01.0179.014.020.019.04.018.017.09.08.011.024.03.0
124.011.0188.07.09.08.027.04.08.021.044.03.02.07.021.02.0
130.014.06.03.09.018.011.09.07.0224.033.016.03.010.03.00.0
140.010.08.01.0164.032.038.032.019.014.016.04.02.011.09.06.0
1531.056.060.038.014.019.020.014.015.027.017.012.03.015.014.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.047-0.291-0.084-1.1490.5270.793-1.149-0.807-0.4140.5270.163-0.553-1.6721.136-0.291-1.931
02-0.8070.1260.552-1.2951.805-0.084-1.465-0.631-0.8070.0870.199-0.909-1.149-0.715-0.481-2.832
03-1.6721.762-0.235-0.7150.1260.42-1.149-0.414-0.2910.2340.331-0.909-2.284-1.149-0.481-1.465
04-0.351-2.2840.3-4.1431.079-1.6721.755-4.1430.42-1.9310.362-4.143-0.715-1.9310.087-2.832
05-4.143-2.284-4.1431.709-4.143-4.143-4.143-0.631-4.143-4.143-2.8322.258-4.143-4.143-4.143-2.832
06-4.143-4.143-4.143-4.143-2.832-4.143-2.832-4.143-4.143-4.143-2.832-4.143-4.143-4.1432.738-1.672
07-2.832-4.143-4.143-4.143-4.143-4.143-4.143-4.1432.707-1.465-1.022-4.143-1.672-4.143-4.143-4.143
08-1.2952.5080.6-0.132-4.143-1.672-4.143-2.832-4.143-1.672-4.143-1.672-4.143-4.143-4.143-4.143
09-4.143-2.832-2.832-1.6720.420.6460.7731.956-2.284-2.832-2.2840.475-1.672-1.295-0.715-1.672
10-1.4650.126-1.931-1.149-1.149-0.132-0.631-0.553-0.9090.234-0.481-0.631-0.1821.913-0.182-0.481
11-0.182-1.465-0.414-2.8322.043-0.481-0.132-0.182-1.672-0.235-0.291-0.909-1.022-0.7150.047-1.931
12-1.672-0.7152.092-1.149-0.909-1.0220.163-1.672-1.022-0.0840.646-1.931-2.284-1.149-0.084-2.284
13-4.143-0.481-1.295-1.931-0.909-0.235-0.715-0.909-1.1492.2670.362-0.351-1.931-0.807-1.931-4.143
14-4.143-0.807-1.022-2.8321.9560.3310.5010.331-0.182-0.481-0.351-1.672-2.284-0.715-0.909-1.295
150.30.8860.9540.501-0.481-0.182-0.132-0.481-0.4140.163-0.291-0.631-1.931-0.414-0.481-0.715