Model info
| Transcription factor | NFE2 (GeneCards) | ||||||||
| Model | NFE2_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvRTGACWCAGCW | ||||||||
| Best auROC (human) | 0.937 | ||||||||
| Best auROC (mouse) | 0.991 | ||||||||
| Peak sets in benchmark (human) | 17 | ||||||||
| Peak sets in benchmark (mouse) | 9 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
| HGNC | HGNC:7780 | ||||||||
| EntrezGene | GeneID:4778 (SSTAR profile) | ||||||||
| UniProt ID | NFE2_HUMAN | ||||||||
| UniProt AC | Q16621 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | NFE2 expression | ||||||||
| ReMap ChIP-seq dataset list | NFE2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 122.0 | 144.0 | 178.0 | 56.0 |
| 02 | 129.0 | 166.0 | 148.0 | 57.0 |
| 03 | 290.0 | 21.0 | 179.0 | 10.0 |
| 04 | 1.0 | 3.0 | 18.0 | 478.0 |
| 05 | 2.0 | 12.0 | 483.0 | 3.0 |
| 06 | 479.0 | 4.0 | 11.0 | 6.0 |
| 07 | 11.0 | 394.0 | 75.0 | 20.0 |
| 08 | 48.0 | 29.0 | 27.0 | 396.0 |
| 09 | 41.0 | 416.0 | 16.0 | 27.0 |
| 10 | 402.0 | 14.0 | 46.0 | 38.0 |
| 11 | 16.0 | 4.0 | 458.0 | 22.0 |
| 12 | 13.0 | 466.0 | 19.0 | 2.0 |
| 13 | 380.0 | 26.0 | 44.0 | 50.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.024 | 0.14 | 0.35 | -0.788 |
| 02 | 0.031 | 0.281 | 0.167 | -0.771 |
| 03 | 0.835 | -1.725 | 0.355 | -2.394 |
| 04 | -3.903 | -3.325 | -1.868 | 1.332 |
| 05 | -3.573 | -2.234 | 1.343 | -3.325 |
| 06 | 1.334 | -3.126 | -2.311 | -2.819 |
| 07 | -2.311 | 1.14 | -0.503 | -1.77 |
| 08 | -0.938 | -1.421 | -1.489 | 1.145 |
| 09 | -1.09 | 1.194 | -1.975 | -1.489 |
| 10 | 1.16 | -2.096 | -0.979 | -1.163 |
| 11 | -1.975 | -3.126 | 1.29 | -1.681 |
| 12 | -2.163 | 1.307 | -1.818 | -3.573 |
| 13 | 1.104 | -1.525 | -1.022 | -0.898 |