We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNFE2
(GeneCards)
ModelNFE2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusvvRTGACWCAGCW
Best auROC (human)0.937
Best auROC (mouse)0.991
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)9
Aligned words500
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
HGNCHGNC:7780
EntrezGeneGeneID:4778
(SSTAR profile)
UniProt IDNFE2_HUMAN
UniProt ACQ16621
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.62531
0.0005 4.69101
0.0001 6.9407250000000005
GTEx tissue expression atlas NFE2 expression
ReMap ChIP-seq dataset list NFE2 datasets
Motifs in JASPAR
MA0501.1 (MAF::NFE2; Homo sapiens)
MA0841.1 (NFE2; Homo sapiens)
PCM
ACGT
01122.0144.0178.056.0
02129.0166.0148.057.0
03290.021.0179.010.0
041.03.018.0478.0
052.012.0483.03.0
06479.04.011.06.0
0711.0394.075.020.0
0848.029.027.0396.0
0941.0416.016.027.0
10402.014.046.038.0
1116.04.0458.022.0
1213.0466.019.02.0
13380.026.044.050.0
PWM
ACGT
01-0.0240.140.35-0.788
020.0310.2810.167-0.771
030.835-1.7250.355-2.394
04-3.903-3.325-1.8681.332
05-3.573-2.2341.343-3.325
061.334-3.126-2.311-2.819
07-2.3111.14-0.503-1.77
08-0.938-1.421-1.4891.145
09-1.091.194-1.975-1.489
101.16-2.096-0.979-1.163
11-1.975-3.1261.29-1.681
12-2.1631.307-1.818-3.573
131.104-1.525-1.022-0.898