We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNfe2
ModelNFE2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusvRTGACTCAGCAndhhn
Best auROC (human)0.904
Best auROC (mouse)0.996
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)9
Aligned words392
TF familyJun-related factors {1.1.1}
TF subfamilyNF-E2-like factors {1.1.1.2}
MGIMGI:97308
EntrezGeneGeneID:18022
(SSTAR profile)
UniProt IDNFE2_MOUSE
UniProt ACQ07279
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.86416
0.0005 6.4584600000000005
0.0001 12.106660000000002
GTEx tissue expression atlas Nfe2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0157.00.036.01.094.04.04.00.0110.05.033.00.015.04.020.00.0
021.00.01.0274.00.00.00.013.00.00.00.093.00.00.00.01.0
030.00.01.00.00.00.00.00.01.00.00.00.00.00.0380.01.0
041.00.00.00.00.00.00.00.0381.00.00.00.01.00.00.00.0
0514.0301.058.010.00.00.00.00.00.00.00.00.00.00.00.00.0
060.00.01.013.019.07.06.0269.00.01.00.057.01.01.02.06.0
074.013.02.01.01.06.01.01.00.07.02.00.016.0304.012.013.0
0815.00.06.00.0317.01.07.05.01.00.011.05.04.00.010.01.0
090.02.0332.03.00.00.01.00.03.00.030.01.00.00.011.00.0
100.03.00.00.00.02.00.00.01.0368.03.02.01.02.00.01.0
112.00.00.00.0341.05.018.011.01.01.01.00.00.02.01.00.0
1280.064.0141.059.05.02.00.01.03.06.05.06.03.01.05.02.0
1338.06.018.029.023.08.03.039.045.014.023.069.08.013.013.034.0
1463.011.013.027.017.06.01.017.031.05.03.018.015.019.07.0130.0
1554.020.028.024.014.010.01.016.06.05.04.09.058.040.015.079.0
1670.018.024.020.018.020.03.034.011.012.012.013.020.040.020.048.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.859-4.180.403-2.8751.356-1.716-1.716-4.181.513-1.510.317-4.18-0.458-1.716-0.177-4.18
02-2.875-4.18-2.8752.424-4.18-4.18-4.18-0.598-4.18-4.18-4.181.346-4.18-4.18-4.18-2.875
03-4.18-4.18-2.875-4.18-4.18-4.18-4.18-4.18-2.875-4.18-4.18-4.18-4.18-4.182.75-2.875
04-2.875-4.18-4.18-4.18-4.18-4.18-4.18-4.182.753-4.18-4.18-4.18-2.875-4.18-4.18-4.18
05-0.5262.5170.876-0.852-4.18-4.18-4.18-4.18-4.18-4.18-4.18-4.18-4.18-4.18-4.18-4.18
06-4.18-4.18-2.875-0.598-0.227-1.193-1.3392.405-4.18-2.875-4.180.859-2.875-2.875-2.327-1.339
07-1.716-0.598-2.327-2.875-2.875-1.339-2.875-2.875-4.18-1.193-2.327-4.18-0.3952.527-0.675-0.598
08-0.458-4.18-1.339-4.182.569-2.875-1.193-1.51-2.875-4.18-0.76-1.51-1.716-4.18-0.852-2.875
09-4.18-2.3272.615-1.975-4.18-4.18-2.875-4.18-1.975-4.180.223-2.875-4.18-4.18-0.76-4.18
10-4.18-1.975-4.18-4.18-4.18-2.327-4.18-4.18-2.8752.718-1.975-2.327-2.875-2.327-4.18-2.875
11-2.327-4.18-4.18-4.182.642-1.51-0.28-0.76-2.875-2.875-2.875-4.18-4.18-2.327-2.875-4.18
121.1960.9741.7610.893-1.51-2.327-4.18-2.875-1.975-1.339-1.51-1.339-1.975-2.875-1.51-2.327
130.456-1.339-0.280.189-0.039-1.066-1.9750.4820.624-0.526-0.0391.049-1.066-0.598-0.5980.346
140.958-0.76-0.5980.119-0.336-1.339-2.875-0.3360.255-1.51-1.975-0.28-0.458-0.227-1.1931.68
150.805-0.1770.1550.003-0.526-0.852-2.875-0.395-1.339-1.51-1.716-0.9530.8760.507-0.4581.183
161.063-0.280.003-0.177-0.28-0.177-1.9750.346-0.76-0.675-0.675-0.598-0.1770.507-0.1770.688