Model info
| Transcription factor | Nfe2 | ||||||||
| Model | NFE2_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RTGASTCAGCAddh | ||||||||
| Best auROC (human) | 0.905 | ||||||||
| Best auROC (mouse) | 0.992 | ||||||||
| Peak sets in benchmark (human) | 17 | ||||||||
| Peak sets in benchmark (mouse) | 9 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
| MGI | MGI:97308 | ||||||||
| EntrezGene | GeneID:18022 (SSTAR profile) | ||||||||
| UniProt ID | NFE2_MOUSE | ||||||||
| UniProt AC | Q07279 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Nfe2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 340.0 | 13.0 | 146.0 | 1.0 |
| 02 | 1.0 | 0.0 | 5.0 | 494.0 |
| 03 | 1.0 | 0.0 | 495.0 | 4.0 |
| 04 | 490.0 | 2.0 | 5.0 | 3.0 |
| 05 | 18.0 | 384.0 | 82.0 | 16.0 |
| 06 | 29.0 | 5.0 | 10.0 | 456.0 |
| 07 | 30.0 | 424.0 | 28.0 | 18.0 |
| 08 | 435.0 | 4.0 | 36.0 | 25.0 |
| 09 | 8.0 | 0.0 | 484.0 | 8.0 |
| 10 | 11.0 | 471.0 | 11.0 | 7.0 |
| 11 | 436.0 | 12.0 | 28.0 | 24.0 |
| 12 | 139.0 | 71.0 | 203.0 | 87.0 |
| 13 | 164.0 | 58.0 | 82.0 | 196.0 |
| 14 | 175.0 | 56.0 | 35.0 | 234.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.993 | -2.163 | 0.154 | -3.903 |
| 02 | -3.903 | -4.4 | -2.961 | 1.365 |
| 03 | -3.903 | -4.4 | 1.367 | -3.126 |
| 04 | 1.357 | -3.573 | -2.961 | -3.325 |
| 05 | -1.868 | 1.114 | -0.415 | -1.975 |
| 06 | -1.421 | -2.961 | -2.394 | 1.285 |
| 07 | -1.389 | 1.213 | -1.454 | -1.868 |
| 08 | 1.238 | -3.126 | -1.215 | -1.561 |
| 09 | -2.584 | -4.4 | 1.345 | -2.584 |
| 10 | -2.311 | 1.317 | -2.311 | -2.694 |
| 11 | 1.241 | -2.234 | -1.454 | -1.6 |
| 12 | 0.105 | -0.556 | 0.48 | -0.357 |
| 13 | 0.269 | -0.754 | -0.415 | 0.445 |
| 14 | 0.333 | -0.788 | -1.242 | 0.621 |