We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNfil3
ModelNFIL3_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusdvTTATGYAAbn
Best auROC (human)0.576
Best auROC (mouse)0.878
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words504
TF familyC/EBP-related {1.1.8}
TF subfamilyPAR factors {1.1.8.2}
MGIMGI:109495
EntrezGeneGeneID:18030
(SSTAR profile)
UniProt IDNFIL3_MOUSE
UniProt ACO08750
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.64817
0.0005 11.635605
0.0001 15.629235
GTEx tissue expression atlas Nfil3 expression
Motifs in JASPAR
MA0025.1 (NFIL3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0180.010.070.06.030.014.08.06.064.017.047.011.033.020.079.05.0
020.03.00.0204.01.00.00.060.00.02.02.0200.00.00.02.026.0
030.00.01.00.01.00.00.04.00.00.01.03.00.02.0127.0361.0
041.00.00.00.02.00.00.00.0107.04.03.015.0304.01.039.024.0
057.041.024.0342.00.00.01.04.04.00.04.034.02.00.03.034.0
060.00.013.00.00.00.041.00.00.01.031.00.011.08.0388.07.0
070.00.00.011.00.03.00.06.040.0156.04.0273.01.02.01.03.0
0841.00.00.00.0150.09.01.01.05.00.00.00.0252.038.02.01.0
09446.01.00.01.046.00.01.00.03.00.00.00.02.00.00.00.0
1017.0168.0100.0212.01.00.00.00.00.00.01.00.00.00.00.01.0
118.04.04.02.050.046.012.060.036.024.021.020.050.062.051.050.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.932-1.1140.8-1.6-0.04-0.788-1.328-1.60.711-0.5990.404-1.0220.054-0.4390.92-1.77
02-4.4-2.234-4.41.866-3.126-4.4-4.40.646-4.4-2.584-2.5841.846-4.4-4.4-2.584-0.181
03-4.4-4.4-3.126-4.4-3.126-4.4-4.4-1.975-4.4-4.4-3.126-2.234-4.4-2.5841.3932.436
04-3.126-4.4-4.4-4.4-2.584-4.4-4.4-4.41.222-1.975-2.234-0.7212.264-3.1260.219-0.26
05-1.4540.269-0.262.382-4.4-4.4-3.126-1.975-1.975-4.4-1.9750.083-2.584-4.4-2.2340.083
06-4.4-4.4-0.86-4.4-4.4-4.40.269-4.4-4.4-3.126-0.008-4.4-1.022-1.3282.508-1.454
07-4.4-4.4-4.4-1.022-4.4-2.234-4.4-1.60.2441.598-1.9752.157-3.126-2.584-3.126-2.234
080.269-4.4-4.4-4.41.559-1.215-3.126-3.126-1.77-4.4-4.4-4.42.0770.193-2.584-3.126
092.647-3.126-4.4-3.1260.383-4.4-3.126-4.4-2.234-4.4-4.4-4.4-2.584-4.4-4.4-4.4
10-0.5991.6721.1551.904-3.126-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4-3.126
11-1.328-1.975-1.975-2.5840.4650.383-0.9380.6460.14-0.26-0.392-0.4390.4650.6790.4850.465