Check the newest release v13
Model info
Transcription factorNFKB2
(GeneCards)
ModelNFKB2_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusnKGGRAAdYCCCdn
Best auROC (human)0.986
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words511
TF familyNF-kappaB-related factors {6.1.1}
TF subfamilyNF-kappaB p50 subunit-like factors {6.1.1.1}
HGNCHGNC:7795
EntrezGeneGeneID:4791
(SSTAR profile)
UniProt IDNFKB2_HUMAN
UniProt ACQ00653
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.743760000000002
0.0005 10.833215
0.0001 15.129325000000001
GTEx tissue expression atlas NFKB2 expression
ReMap ChIP-seq dataset list NFKB2 datasets
Motifs in JASPAR
MA0778.1 (NFKB2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
016.02.0132.020.022.04.035.037.06.07.0101.014.04.011.086.013.0
028.00.030.00.08.01.014.01.014.00.0337.03.014.01.068.01.0
0316.01.027.00.00.00.02.00.012.01.0423.013.00.00.05.00.0
0425.00.01.02.02.00.00.00.0287.05.0157.08.08.00.04.01.0
05275.025.021.01.04.01.00.00.0140.05.017.00.011.00.00.00.0
06404.014.05.07.029.01.01.00.038.00.00.00.01.00.00.00.0
0778.054.0206.0134.02.02.03.08.00.00.04.02.00.00.07.00.0
0817.044.00.019.02.031.00.023.013.0117.09.081.07.080.00.057.0
099.030.00.00.044.0227.00.01.02.07.00.00.010.0166.03.01.0
103.059.01.02.00.0426.00.04.00.02.00.01.00.01.01.00.0
110.03.00.00.058.0390.012.028.02.00.00.00.00.04.01.02.0
1215.08.026.011.0111.071.045.0170.01.01.08.03.02.01.016.011.0
1331.021.051.026.031.08.012.030.018.020.048.09.036.038.067.054.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.6-2.5841.431-0.439-0.346-1.9750.1120.167-1.6-1.4541.165-0.788-1.975-1.0221.004-0.86
02-1.328-4.4-0.04-4.4-1.328-3.126-0.788-3.126-0.788-4.42.367-2.234-0.788-3.1260.771-3.126
03-0.658-3.126-0.144-4.4-4.4-4.4-2.584-4.4-0.938-3.1262.594-0.86-4.4-4.4-1.77-4.4
04-0.22-4.4-3.126-2.584-2.584-4.4-4.4-4.42.206-1.771.604-1.328-1.328-4.4-1.975-3.126
052.164-0.22-0.392-3.126-1.975-3.126-4.4-4.41.49-1.77-0.599-4.4-1.022-4.4-4.4-4.4
062.548-0.788-1.77-1.454-0.074-3.126-3.126-4.40.193-4.4-4.4-4.4-3.126-4.4-4.4-4.4
070.9070.5421.8751.446-2.584-2.584-2.234-1.328-4.4-4.4-1.975-2.584-4.4-4.4-1.454-4.4
08-0.5990.339-4.4-0.49-2.584-0.008-4.4-0.302-0.861.311-1.2150.945-1.4540.932-4.40.595
09-1.215-0.04-4.4-4.40.3391.972-4.4-3.126-2.584-1.454-4.4-4.4-1.1141.66-2.234-3.126
10-2.2340.63-3.126-2.584-4.42.601-4.4-1.975-4.4-2.584-4.4-3.126-4.4-3.126-3.126-4.4
11-4.4-2.234-4.4-4.40.6132.513-0.938-0.108-2.584-4.4-4.4-4.4-4.4-1.975-3.126-2.584
12-0.721-1.328-0.181-1.0221.2590.8140.3611.684-3.126-3.126-1.328-2.234-2.584-3.126-0.658-1.022
13-0.008-0.3920.485-0.181-0.008-1.328-0.938-0.04-0.543-0.4390.425-1.2150.140.1930.7560.542